RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 DIRC1Q969H9 104 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 ANGP03950 147 aaKnown RBP7.82□□□□□ -1.16
PTCH1-204ENST00000375290 C20orf173Q96LM9 149 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 BRD3OSQ6XYD6 125 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 GNRH2O43555 120 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 LST1O00453 97 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 LECT2O14960 151 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 SP5Q6BEB4 398 aaPredicted RBP7.81□□□□□ -1.16
PTCH1-204ENST00000375290 C5orf56Q8N8D9 126 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
PTCH1-204ENST00000375290 COX8CQ7Z4L0 72 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 UPK3BQ9BT76 320 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 CTSZQ9UBR2 303 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 KIAA1549Q9HCM3 1950 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 U3KQE9 123 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 PLXNB1O43157 2135 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 IGHV3-33P01772 117 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 MT-ATP8P03928 68 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
PTCH1-204ENST00000375290 TRBV12-3P01733 135 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 LOXL1Q08397 574 aaPredicted RBP7.81□□□□□ -1.16
PTCH1-204ENST00000375290 WNK1Q9H4A3 2382 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 INSL3P51460 131 aa7.81□□□□□ -1.16
PTCH1-204ENST00000375290 TP53TG3Q9ULZ0 132 aa7.8□□□□□ -1.16
PTCH1-204ENST00000375290 TEX49A0A1B0GTD5 131 aa7.8□□□□□ -1.16
PTCH1-204ENST00000375290 TNRC6BQ9UPQ9 1833 aaKnown RBP7.8□□□□□ -1.16
PTCH1-204ENST00000375290 A0A1W2PRX2 142 aa7.8□□□□□ -1.16
PTCH1-204ENST00000375290 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
PTCH1-204ENST00000375290 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
PTCH1-204ENST00000375290 FANCD2OSQ96PS1 177 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 TRAV12-2A0A075B6T6 113 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 PRR31Q5SQ13 230 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 PRSS33Q8NF86 280 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 PROP1O75360 226 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 IGF1P05019 195 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 Q8N9W7 124 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 ZNRD1Q9P1U0 126 aa7.79□□□□□ -1.16
PTCH1-204ENST00000375290 F5H768 121 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 DIAPH2-AS1Q14236 149 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 MUC22E2RYF6 1773 aaPredicted RBP7.78□□□□□ -1.16
PTCH1-204ENST00000375290 SMIM9A6NGZ8 99 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
PTCH1-204ENST00000375290 ETDCA0A1B0GVM5 59 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
PTCH1-204ENST00000375290 WISP1O95388 367 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 CEP192Q8TEP8 1941 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 EBI3Q14213 229 aa7.78□□□□□ -1.16
PTCH1-204ENST00000375290 WFDC9Q8NEX5 89 aa7.77□□□□□ -1.16
PTCH1-204ENST00000375290 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
PTCH1-204ENST00000375290 BLCAPP62952 87 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 NXPH4O95158 308 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 ODF3BA8MYP8 253 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 Q6JHZ5 121 aa7.77□□□□□ -1.17
PTCH1-204ENST00000375290 XCL1P47992 114 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 MIR7-3HGQ8N6C7 128 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 C4orf3Q8WVX3 66 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 RPL35AP18077 110 aaKnown RBP7.76□□□□□ -1.17
PTCH1-204ENST00000375290 RPL39P62891 51 aaKnown RBP7.76□□□□□ -1.17
PTCH1-204ENST00000375290 BRK1Q8WUW1 75 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 UBE2D3P61077 147 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 UBE2D2P62837 147 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 PCNX3Q9H6A9 2034 aa7.76□□□□□ -1.17
PTCH1-204ENST00000375290 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 TRIAP1O43715 76 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 LY6DQ14210 128 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 GDF5OSQ5U4N7 250 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 PRORYQ9H606 182 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 FAM110AQ9BQ89 295 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 CAMK2N2Q96S95 79 aa7.75□□□□□ -1.17
PTCH1-204ENST00000375290 PRB3Q04118 309 aaPredicted RBP7.75□□□□□ -1.17
PTCH1-204ENST00000375290 NOP10Q9NPE3 64 aaKnown RBP7.75□□□□□ -1.17
PTCH1-204ENST00000375290 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 DAZAP2Q15038 168 aaPredicted RBP7.74□□□□□ -1.17
PTCH1-204ENST00000375290 CRIP3Q6Q6R5 217 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 PIP4P1Q86T03 277 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 BPY2O14599 106 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 COX7BP24311 80 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 IGHV3-38A0A0C4DH36 116 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 SPART-AS1P0CW21 52 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 NBASA2RRP1 2371 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 SMIM26A0A096LP01 95 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
PTCH1-204ENST00000375290 KIR2DL5BQ8NHK3 375 aa7.73□□□□□ -1.17
PTCH1-204ENST00000375290 ZNF22P17026 224 aaPredicted RBP7.73□□□□□ -1.17
PTCH1-204ENST00000375290 BRWD1-AS2P59051 145 aa7.73□□□□□ -1.17
PTCH1-204ENST00000375290 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
PTCH1-204ENST00000375290 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms