RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 ACANP16112 2415 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 A8MWV9 139 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 I3L3M4 83 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 M0QY20 66 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 KHDC1LQ5JSQ8 128 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 AMTNQ6UX39 209 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 SPCS1Q9Y6A9 102 aa9.05□□□□□ -0.96
UBR4-203ENST00000375225 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
UBR4-203ENST00000375225 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 CRYGDP07320 174 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 FXYD2P54710 66 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 SLURP1P55000 103 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 DEFB131AP59861 70 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 UFSP1Q6NVU6 142 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 Q6ZSV7 163 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 LINC00467Q9BRT7 94 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
UBR4-203ENST00000375225 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
UBR4-203ENST00000375225 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 MUC4Q99102 2169 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 H3BMM0 161 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 M0R2P5 195 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 RHODO00212 210 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 DUX3Q96PT4 197 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
UBR4-203ENST00000375225 SPXQ9BT56 116 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 JPT2Q9H910 190 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 HIVEP2P31629 2446 aa9.03□□□□□ -0.96
UBR4-203ENST00000375225 INAFM1C9JVW0 142 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 CRYBA4P53673 196 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
UBR4-203ENST00000375225 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 CLUHP3Q96NS8 147 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
UBR4-203ENST00000375225 INSP01308 110 aa9.01□□□□□ -0.97
UBR4-203ENST00000375225 OCIAD2Q56VL3 154 aa9.01□□□□□ -0.97
UBR4-203ENST00000375225 NEGR1Q7Z3B1 354 aa9.01□□□□□ -0.97
UBR4-203ENST00000375225 TNFRSF18Q9Y5U5 241 aa9.01□□□□□ -0.97
UBR4-203ENST00000375225 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
UBR4-203ENST00000375225 KNCNA6PVL3 124 aa9□□□□□ -0.97
UBR4-203ENST00000375225 C12orf74Q32Q52 190 aa9□□□□□ -0.97
UBR4-203ENST00000375225 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
UBR4-203ENST00000375225 DNAJC30Q96LL9 226 aa9□□□□□ -0.97
UBR4-203ENST00000375225 C16orf95Q9H693 158 aa9□□□□□ -0.97
UBR4-203ENST00000375225 OTOGQ6ZRI0 2925 aa9□□□□□ -0.97
UBR4-203ENST00000375225 LGALS3P17931 250 aaKnown RBP9□□□□□ -0.97
UBR4-203ENST00000375225 SRSF9Q13242 221 aaKnown RBP eCLIP9□□□□□ -0.97
UBR4-203ENST00000375225 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
UBR4-203ENST00000375225 NFE4Q86UQ8 179 aa9□□□□□ -0.97
UBR4-203ENST00000375225 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
UBR4-203ENST00000375225 RNASE8Q8TDE3 154 aaKnown RBP9□□□□□ -0.97
UBR4-203ENST00000375225 MAP6D1Q9H9H5 199 aa9□□□□□ -0.97
UBR4-203ENST00000375225 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 DEFB114Q30KQ6 69 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
UBR4-203ENST00000375225 TMEM61Q8N0U2 210 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 ZNF479Q96JC4 524 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 VCX2Q9H322 139 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
UBR4-203ENST00000375225 A0A1B0GWB2 263 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 IGLL5B9A064 214 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 NDUFA7O95182 113 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 TSHBP01222 138 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
UBR4-203ENST00000375225 DEFB136Q30KP8 78 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 PHLDA1Q8WV24 401 aaPredicted RBP8.98□□□□□ -0.97
UBR4-203ENST00000375225 PLEKHB2Q96CS7 222 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 LINC01587Q99440 93 aa8.98□□□□□ -0.97
UBR4-203ENST00000375225 SPANXB1Q9NS25 103 aaPredicted RBP8.98□□□□□ -0.97
UBR4-203ENST00000375225 CRLF1O75462 422 aa8.97□□□□□ -0.97
UBR4-203ENST00000375225 RBX1P62877 108 aa8.97□□□□□ -0.97
UBR4-203ENST00000375225 MORN3Q6PF18 240 aaPredicted RBP8.97□□□□□ -0.97
UBR4-203ENST00000375225 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
UBR4-203ENST00000375225 LEPROTO15243 131 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 HTN1P15515 57 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 RNF151Q2KHN1 245 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 RRN3P1Q2M238 152 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 STHQ8IWL8 128 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 LINC01006Q8NI28 216 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 VPS25Q9BRG1 176 aa8.96□□□□□ -0.97
UBR4-203ENST00000375225 F8W1H4 67 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 K7ERJ3 54 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 C18orf65Q6ZTR6 163 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 NAA38Q9BRA0 125 aaKnown RBP8.95□□□□□ -0.98
UBR4-203ENST00000375225 SPANXA1Q9NS26 97 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 ANK3Q12955 4377 aaKnown RBP8.95□□□□□ -0.98
UBR4-203ENST00000375225 J3QQQ9 107 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 J3QR89 54 aa8.95□□□□□ -0.98
UBR4-203ENST00000375225 CD28P10747 220 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms