RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TEP1Q99973 2627 aaKnown RBP7.19□□□□□ -1.26
SF3A3-201ENST00000373019 EDN2P20800 178 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 CNEP1R1Q8N9A8 125 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 FAM19A4Q96LR4 140 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 LITAFQ99732 161 aa7.19□□□□□ -1.26
SF3A3-201ENST00000373019 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
SF3A3-201ENST00000373019 ABCA2Q9BZC7 2435 aa7.18□□□□□ -1.26
SF3A3-201ENST00000373019 MRAPQ8TCY5 172 aa7.18□□□□□ -1.26
SF3A3-201ENST00000373019 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-201ENST00000373019 JMJD1CQ15652 2540 aa7.18□□□□□ -1.26
SF3A3-201ENST00000373019 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
SF3A3-201ENST00000373019 IGHV1-46P01743 117 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 CXCL5P42830 114 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 DLX1P56177 255 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 DUX5Q96PT3 197 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 SVEP1Q4LDE5 3571 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 IGLV3-9A0A075B6K5 115 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 UPK3BQ9BT76 320 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 PRRC2AP48634 2157 aaKnown RBP7.17□□□□□ -1.26
SF3A3-201ENST00000373019 IGHV1-69DA0A0B4J2H0 117 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 MBD3L4A6NDZ8 208 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-201ENST00000373019 MBD3L3A6NE82 208 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-201ENST00000373019 MBD3L5A6NJ08 208 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-201ENST00000373019 I3L3M4 83 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 J3QKU1 62 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 LEPROTO15243 131 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 TRACP01848 142 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 DLX6P56179 175 aa7.17□□□□□ -1.26
SF3A3-201ENST00000373019 TRBV7-1A0A0A6YYK4 115 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 ANKHD1Q8IWZ3 2542 aaKnown RBP7.16□□□□□ -1.26
SF3A3-201ENST00000373019 TRAV8-3A0A0A6YYJ7 113 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 A0A0J9YXY3 114 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 TMEM258P61165 79 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 RHOHQ15669 191 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 ZNF843Q8N446 348 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 IGHV3-64A0A075B6Q5 118 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 PRB3Q04118 309 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-201ENST00000373019 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 MAST4O15021 2626 aa7.16□□□□□ -1.26
SF3A3-201ENST00000373019 UTP20O75691 2785 aaKnown RBP7.15□□□□□ -1.26
SF3A3-201ENST00000373019 IGHV3OR16-8A0A075B7F1 116 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 ADAMTSL4-AS1Q5T5F5 129 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 PRR9Q5T870 116 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 SLC25A15Q9Y619 301 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 A0A0J9YX75 114 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 M0R381 172 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 CCL21O00585 134 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 DPH3P1Q9H4G8 78 aa7.15□□□□□ -1.26
SF3A3-201ENST00000373019 ACANP16112 2415 aa7.15□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV1-3A0A0C4DH29 117 aa7.15□□□□□ -1.27
SF3A3-201ENST00000373019 TIMM17AQ99595 171 aa7.15□□□□□ -1.27
SF3A3-201ENST00000373019 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.27
SF3A3-201ENST00000373019 SDHAF1A6NFY7 115 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 COX6CP09669 75 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 PYGO1Q9Y3Y4 419 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV1-8P0DP01 117 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 LYPD2Q6UXB3 125 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 RNF152Q8N8N0 203 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 TMEM141Q96I45 108 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 OPRPNQ99935 248 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-201ENST00000373019 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 ATOX1O00244 68 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV3-23P01764 117 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 Q8NA96 180 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 C9orf106Q8NAJ2 232 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 JPT2Q9H910 190 aa7.14□□□□□ -1.27
SF3A3-201ENST00000373019 SONP18583 2426 aaKnown RBP7.14□□□□□ -1.27
SF3A3-201ENST00000373019 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 POLR2KP53803 58 aaKnown RBP7.13□□□□□ -1.27
SF3A3-201ENST00000373019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 LINC00477Q96M19 166 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 PEMTQ9UBM1 199 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 IGLV11-55A0A075B6I3 123 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 IGLV1-47P01700 117 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 IGF1P05019 195 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 CTSGP08311 255 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 MGPP08493 103 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 CCL8P80075 99 aa7.13□□□□□ -1.27
SF3A3-201ENST00000373019 MUC4Q99102 2169 aa7.12□□□□□ -1.27
SF3A3-201ENST00000373019 M0R1B8 84 aa7.12□□□□□ -1.27
SF3A3-201ENST00000373019 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-201ENST00000373019 LINC00315P59091 139 aa7.12□□□□□ -1.27
SF3A3-201ENST00000373019 F8WDY8 70 aa7.12□□□□□ -1.27
SF3A3-201ENST00000373019 PRSS2P07478 247 aa7.12□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV3-35A0A0C4DH35 117 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 TMEM61Q8N0U2 210 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 ADGRG4Q8IZF6 3080 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 DOPEY1Q5JWR5 2465 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV3OR16-10A0A075B7F0 116 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 RPL18AQ02543 176 aaKnown RBP7.11□□□□□ -1.27
SF3A3-201ENST00000373019 DAZ2Q13117 558 aaKnown RBP7.11□□□□□ -1.27
SF3A3-201ENST00000373019 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
SF3A3-201ENST00000373019 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
SF3A3-201ENST00000373019 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
SF3A3-201ENST00000373019 KIF25-AS1Q9Y6Z4 181 aa7.11□□□□□ -1.27
SF3A3-201ENST00000373019 IGHV4OR15-8A0A075B7B6 117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms