RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
CD40-201ENST00000372276 SPCS1Q9Y6A9 102 aa13.31□□□□□ -0.28
CD40-201ENST00000372276 TRBV7-3A0A075B6L6 115 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 K7ERU9 68 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 RHODO00212 210 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 TSHBP01222 138 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 NEGR1Q7Z3B1 354 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 NFE4Q86UQ8 179 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
CD40-201ENST00000372276 IGLV4-69A0A075B6H9 119 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
CD40-201ENST00000372276 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 MORN3Q6PF18 240 aaPredicted RBP13.29□□□□□ -0.28
CD40-201ENST00000372276 TMEM61Q8N0U2 210 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 C20orf203Q8NBC4 194 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 PHLDA1Q8WV24 401 aaPredicted RBP13.29□□□□□ -0.28
CD40-201ENST00000372276 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 NHP2Q9NX24 153 aaKnown RBP13.29□□□□□ -0.28
CD40-201ENST00000372276 CSMD2Q7Z408 3487 aa13.29□□□□□ -0.28
CD40-201ENST00000372276 A0A1B0GWB2 263 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 ZNF815PA8K554 130 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 RNASE8Q8TDE3 154 aaKnown RBP13.28□□□□□ -0.28
CD40-201ENST00000372276 PYGO1Q9Y3Y4 419 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 PDZD2O15018 2839 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 INSP01308 110 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 KHDC1LQ5JSQ8 128 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 DLX4Q92988 240 aaPredicted RBP13.28□□□□□ -0.28
CD40-201ENST00000372276 DNAJC30Q96LL9 226 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 POLQO75417 2590 aa13.28□□□□□ -0.28
CD40-201ENST00000372276 DEFB136Q30KP8 78 aa13.27□□□□□ -0.29
CD40-201ENST00000372276 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
CD40-201ENST00000372276 RPL39P62891 51 aaKnown RBP13.26□□□□□ -0.29
CD40-201ENST00000372276 Q6ZSV7 163 aa13.26□□□□□ -0.29
CD40-201ENST00000372276 TNFRSF18Q9Y5U5 241 aa13.26□□□□□ -0.29
CD40-201ENST00000372276 RBX1P62877 108 aa13.25□□□□□ -0.29
CD40-201ENST00000372276 C18orf65Q6ZTR6 163 aa13.25□□□□□ -0.29
CD40-201ENST00000372276 NAV2Q8IVL1 2488 aa13.25□□□□□ -0.29
CD40-201ENST00000372276 IGLL5B9A064 214 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
CD40-201ENST00000372276 SPANXB1Q9NS25 103 aaPredicted RBP13.24□□□□□ -0.29
CD40-201ENST00000372276 SVEP1Q4LDE5 3571 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 TEX15Q9BXT5 2789 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
CD40-201ENST00000372276 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
CD40-201ENST00000372276 BEAN1Q3B7T3 259 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 LINC01587Q99440 93 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 VCX2Q9H322 139 aa13.24□□□□□ -0.29
CD40-201ENST00000372276 AGRNO00468 2067 aa13.23□□□□□ -0.29
CD40-201ENST00000372276 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
CD40-201ENST00000372276 SRSF9Q13242 221 aaKnown RBP eCLIP13.23□□□□□ -0.29
CD40-201ENST00000372276 FHL3Q13643 280 aa13.23□□□□□ -0.29
CD40-201ENST00000372276 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
CD40-201ENST00000372276 ZNF479Q96JC4 524 aa13.23□□□□□ -0.29
CD40-201ENST00000372276 RBMY1BA6NDE4 496 aaKnown RBP13.22□□□□□ -0.29
CD40-201ENST00000372276 RBMY1EA6NEQ0 496 aaKnown RBP13.22□□□□□ -0.29
CD40-201ENST00000372276 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
CD40-201ENST00000372276 RBMY1DP0C7P1 496 aaKnown RBP13.22□□□□□ -0.29
CD40-201ENST00000372276 P0DMU3 169 aa13.22□□□□□ -0.29
CD40-201ENST00000372276 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
CD40-201ENST00000372276 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
CD40-201ENST00000372276 MAST4O15021 2626 aa13.22□□□□□ -0.29
CD40-201ENST00000372276 LEPROTO15243 131 aa13.21□□□□□ -0.29
CD40-201ENST00000372276 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.29
CD40-201ENST00000372276 RRN3P1Q2M238 152 aa13.21□□□□□ -0.29
CD40-201ENST00000372276 PLEKHB2Q96CS7 222 aa13.21□□□□□ -0.29
CD40-201ENST00000372276 C16orf95Q9H693 158 aa13.21□□□□□ -0.3
CD40-201ENST00000372276 SPANXA1Q9NS26 97 aa13.21□□□□□ -0.3
CD40-201ENST00000372276 LYRM7Q5U5X0 104 aa13.2□□□□□ -0.3
CD40-201ENST00000372276 CELSR1Q9NYQ6 3014 aa13.2□□□□□ -0.3
CD40-201ENST00000372276 A0A0J9YY99 117 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 F8W1H4 67 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 J3QQQ9 107 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 K7ERJ3 54 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 RS1O15537 224 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 HTN1P15515 57 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 CFAP126Q5VTH2 177 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 STHQ8IWL8 128 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
CD40-201ENST00000372276 NAA38Q9BRA0 125 aaKnown RBP13.19□□□□□ -0.3
CD40-201ENST00000372276 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
CD40-201ENST00000372276 VPS13CQ709C8 3753 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 TMEM223A0PJW6 202 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 CCL24O00175 119 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 SLC25A29Q8N8R3 303 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 C11orf72Q8NBR9 251 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 AMELXQ99217 191 aa13.18□□□□□ -0.3
CD40-201ENST00000372276 UBE2D1P51668 147 aa13.17□□□□□ -0.3
CD40-201ENST00000372276 WFDC11Q8NEX6 87 aa13.17□□□□□ -0.3
CD40-201ENST00000372276 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
CD40-201ENST00000372276 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
CD40-201ENST00000372276 SORL1Q92673 2214 aa13.16□□□□□ -0.3
CD40-201ENST00000372276 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms