RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NACAE9PAV3 2078 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 Q8NA96 180 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 M0QY20 66 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 IGHG2P01859 326 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 LINC00694P0DN24 101 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 OOSP1A8MZH6 123 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 KLLNB2CW77 178 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 B9A039 149 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 LST1O00453 97 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 METTL26Q96S19 204 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 Q9UF83 564 aa8.61□□□□□ -1.03
SMARCA1-201ENST00000371121 I3L3M4 83 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 M0R1W7 72 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 EEF1AKMT3Q96AZ1 226 aa8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-201ENST00000371121 VCYO14598 125 aa8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 CDSNQ15517 529 aa8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 C9orf139Q6ZV77 190 aa8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 BEAN1Q3B7T3 259 aa8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 ABCA2Q9BZC7 2435 aa8.59□□□□□ -1.03
SMARCA1-201ENST00000371121 NPC2P61916 151 aa8.58□□□□□ -1.04
SMARCA1-201ENST00000371121 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
SMARCA1-201ENST00000371121 CACNA1HO95180 2353 aa8.58□□□□□ -1.04
SMARCA1-201ENST00000371121 SIRPDQ9H106 197 aa8.58□□□□□ -1.04
SMARCA1-201ENST00000371121 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 H3BT86 120 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 LINC01560Q8TB33 94 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 IGF2-ASQ6U949 168 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 TMEM61Q8N0U2 210 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 PPP1R17O96001 155 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 Q1RN00 199 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 NRGNQ92686 78 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 SPXQ9BT56 116 aa8.57□□□□□ -1.04
SMARCA1-201ENST00000371121 LY6DQ14210 128 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 DAND5Q8N907 189 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 MINOS1Q5TGZ0 78 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 DEFB124Q8NES8 71 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 Q8N2B8 174 aa8.56□□□□□ -1.04
SMARCA1-201ENST00000371121 SPTBN1Q01082 2364 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 OTOGLQ3ZCN5 2332 aa8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 ANKHD1Q8IWZ3 2542 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 CD3EP07766 207 aa8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 MIAQ16674 131 aa8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 IGHV3-16A0A0C4DH30 117 aa8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 RPL11P62913 178 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-201ENST00000371121 OVOL1O14753 267 aa8.54□□□□□ -1.04
SMARCA1-201ENST00000371121 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
SMARCA1-201ENST00000371121 TMEM126AQ9H061 195 aa8.54□□□□□ -1.04
SMARCA1-201ENST00000371121 YAE1D1Q9NRH1 226 aa8.54□□□□□ -1.04
SMARCA1-201ENST00000371121 SCGB2A1O75556 95 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 IGKV3-7A0A075B6H7 116 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 ATP5J2P56134 94 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 PROK1P58294 105 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 C11orf71Q6IPW1 123 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 EP300Q09472 2414 aaPredicted RBP8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 TMEM219Q86XT9 240 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
SMARCA1-201ENST00000371121 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.04
SMARCA1-201ENST00000371121 NDUFA7O95182 113 aa8.52□□□□□ -1.04
SMARCA1-201ENST00000371121 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.04
SMARCA1-201ENST00000371121 C5orf38Q86SI9 138 aa8.52□□□□□ -1.04
SMARCA1-201ENST00000371121 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.04
SMARCA1-201ENST00000371121 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 OXTP01178 125 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 SAA4P35542 130 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 F5H697 171 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 RHOHQ15669 191 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 SOSTDC1Q6X4U4 206 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms