RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
CKS1B-202ENST00000368436 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 OXTP01178 125 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 ZNF345Q14585 488 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 MIAQ16674 131 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 TMEM97Q5BJF2 176 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-202ENST00000368436 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
CKS1B-202ENST00000368436 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 SMLR1H3BR10 107 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 PFDN1O60925 122 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 TMUB2Q71RG4 321 aa10.36□□□□□ -0.75
CKS1B-202ENST00000368436 A0A1B0GV50 99 aa10.35□□□□□ -0.75
CKS1B-202ENST00000368436 F5H697 171 aa10.35□□□□□ -0.75
CKS1B-202ENST00000368436 PRSS1P07477 247 aa10.35□□□□□ -0.75
CKS1B-202ENST00000368436 RGS21Q2M5E4 152 aa10.35□□□□□ -0.75
CKS1B-202ENST00000368436 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
CKS1B-202ENST00000368436 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
CKS1B-202ENST00000368436 RBX1P62877 108 aa10.34□□□□□ -0.75
CKS1B-202ENST00000368436 SERTAD4-AS1Q5TG53 156 aa10.34□□□□□ -0.75
CKS1B-202ENST00000368436 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
CKS1B-202ENST00000368436 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
CKS1B-202ENST00000368436 HMSDA8MTL9 139 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 SSTP61278 116 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
CKS1B-202ENST00000368436 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
CKS1B-202ENST00000368436 A0A0D9SG52 128 aa10.32□□□□□ -0.76
CKS1B-202ENST00000368436 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
CKS1B-202ENST00000368436 GAGE6Q13070 117 aa10.32□□□□□ -0.76
CKS1B-202ENST00000368436 IQCJQ1A5X6 159 aa10.32□□□□□ -0.76
CKS1B-202ENST00000368436 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
CKS1B-202ENST00000368436 M0QY20 66 aa10.31□□□□□ -0.76
CKS1B-202ENST00000368436 BCL2L11O43521 198 aa10.31□□□□□ -0.76
CKS1B-202ENST00000368436 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
CKS1B-202ENST00000368436 C11orf52Q96A22 123 aa10.31□□□□□ -0.76
CKS1B-202ENST00000368436 KANTRA0A1W2PQU2 76 aa10.3□□□□□ -0.76
CKS1B-202ENST00000368436 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
CKS1B-202ENST00000368436 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
CKS1B-202ENST00000368436 IGHV1-24A0A0C4DH33 117 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 GZMBP10144 247 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 CCL20P78556 96 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
CKS1B-202ENST00000368436 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
CKS1B-202ENST00000368436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.29□□□□□ -0.76
CKS1B-202ENST00000368436 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 H7C1H1 209 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 PANO1I0J062 215 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 HNRNPA3P51991 378 aaKnown RBP10.28□□□□□ -0.76
CKS1B-202ENST00000368436 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
CKS1B-202ENST00000368436 EIF5AP63241 154 aaKnown RBP10.28□□□□□ -0.76
CKS1B-202ENST00000368436 REG3AQ06141 175 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
CKS1B-202ENST00000368436 MGPP08493 103 aa10.27□□□□□ -0.77
CKS1B-202ENST00000368436 CACNG7P62955 275 aa10.27□□□□□ -0.77
CKS1B-202ENST00000368436 OR2D3Q8NGH3 330 aa10.27□□□□□ -0.77
CKS1B-202ENST00000368436 TPPP3Q9BW30 176 aa10.27□□□□□ -0.77
CKS1B-202ENST00000368436 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
CKS1B-202ENST00000368436 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
CKS1B-202ENST00000368436 A0A1B0GUV1 79 aa10.26□□□□□ -0.77
CKS1B-202ENST00000368436 P01737 135 aa10.26□□□□□ -0.77
CKS1B-202ENST00000368436 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
CKS1B-202ENST00000368436 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
CKS1B-202ENST00000368436 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
CKS1B-202ENST00000368436 F2Z2F3 143 aa10.25□□□□□ -0.77
CKS1B-202ENST00000368436 NKX2-5P52952 324 aaPredicted RBP10.25□□□□□ -0.77
CKS1B-202ENST00000368436 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
CKS1B-202ENST00000368436 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
CKS1B-202ENST00000368436 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
CKS1B-202ENST00000368436 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
CKS1B-202ENST00000368436 PGLYRP4Q96LB8 373 aa10.24□□□□□ -0.77
CKS1B-202ENST00000368436 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
CKS1B-202ENST00000368436 GNG4P50150 75 aa10.23□□□□□ -0.77
CKS1B-202ENST00000368436 RAB5CP51148 216 aa10.23□□□□□ -0.77
CKS1B-202ENST00000368436 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
CKS1B-202ENST00000368436 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
CKS1B-202ENST00000368436 hDV102S1A0JD36 115 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 XKRY2A2RUG3 117 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 SLPIP03973 132 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 TRGC1P0CF51 173 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
CKS1B-202ENST00000368436 WDR73Q6P4I2 378 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 C9orf62Q8N4C0 152 aa10.22□□□□□ -0.77
CKS1B-202ENST00000368436 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms