RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RAB4BP61018 213 aa8.84□□□□□ -0.99
VAMP4-202ENST00000367740 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
VAMP4-202ENST00000367740 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.84□□□□□ -0.99
VAMP4-202ENST00000367740 DERL1Q9BUN8 251 aa8.84□□□□□ -0.99
VAMP4-202ENST00000367740 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
VAMP4-202ENST00000367740 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 FABP5P3A8MUU1 101 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 KRBOX1C9JBD0 128 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 ZNF56Q15929 161 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 IQCJQ1A5X6 159 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 CFAP161Q6P656 301 aa8.83□□□□□ -1
VAMP4-202ENST00000367740 GVQW2A0A096LPI5 108 aaPredicted RBP8.82□□□□□ -1
VAMP4-202ENST00000367740 M0R036 132 aa8.82□□□□□ -1
VAMP4-202ENST00000367740 TPT1P13693 172 aaKnown RBP8.82□□□□□ -1
VAMP4-202ENST00000367740 SAPCD1Q5SSQ6 148 aa8.82□□□□□ -1
VAMP4-202ENST00000367740 ZFP82Q8N141 532 aa8.82□□□□□ -1
VAMP4-202ENST00000367740 IGLV1-50A0A075B6I6 118 aa8.81□□□□□ -1
VAMP4-202ENST00000367740 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
VAMP4-202ENST00000367740 SUN5Q8TC36 379 aa8.81□□□□□ -1
VAMP4-202ENST00000367740 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 H3BMQ9 156 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
VAMP4-202ENST00000367740 MT-ND6P03923 174 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 RAB2AP61019 212 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 DIRC1Q969H9 104 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 KRTAP4-11Q9BYQ6 195 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 ARL2-SNX15V9GYD0 113 aa8.8□□□□□ -1
VAMP4-202ENST00000367740 A0A1B0GUV1 79 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 A6NHS1 94 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 KRTAP1-4P0C5Y4 121 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 CRIP1P50238 77 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 C1orf137Q5JT78 98 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 SEC22CQ9BRL7 303 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 EPDR1Q9UM22 224 aa8.79□□□□□ -1
VAMP4-202ENST00000367740 H0Y9J4 135 aa8.78□□□□□ -1
VAMP4-202ENST00000367740 ARL14EPLP0DKL9 152 aa8.78□□□□□ -1
VAMP4-202ENST00000367740 AQP10Q96PS8 301 aa8.78□□□□□ -1
VAMP4-202ENST00000367740 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
VAMP4-202ENST00000367740 TRAV34A0A0B4J273 112 aa8.77□□□□□ -1.01
VAMP4-202ENST00000367740 SULT1A2P50226 295 aa8.77□□□□□ -1.01
VAMP4-202ENST00000367740 TMBIM6P55061 237 aa8.77□□□□□ -1.01
VAMP4-202ENST00000367740 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
VAMP4-202ENST00000367740 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
VAMP4-202ENST00000367740 A0A1W2PPV4 95 aa8.76□□□□□ -1.01
VAMP4-202ENST00000367740 SH2D1AO60880 128 aa8.76□□□□□ -1.01
VAMP4-202ENST00000367740 SUMO1P63165 101 aaKnown RBP8.76□□□□□ -1.01
VAMP4-202ENST00000367740 RBM38Q9H0Z9 239 aaKnown RBP8.76□□□□□ -1.01
VAMP4-202ENST00000367740 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
VAMP4-202ENST00000367740 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
VAMP4-202ENST00000367740 TRIQKQ629K1 86 aa8.75□□□□□ -1.01
VAMP4-202ENST00000367740 Q86TA4 180 aa8.75□□□□□ -1.01
VAMP4-202ENST00000367740 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
VAMP4-202ENST00000367740 AMTP48728 403 aa8.74□□□□□ -1.01
VAMP4-202ENST00000367740 CNPY1Q3B7I2 92 aa8.74□□□□□ -1.01
VAMP4-202ENST00000367740 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
VAMP4-202ENST00000367740 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
VAMP4-202ENST00000367740 TRAV6A0A075B6T7 132 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 IGKV3OR2-268A0A0C4DH90 116 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 F5H697 171 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 H0YIZ8 118 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 STAG3L3P0CL85 134 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 UBE2D1P51668 147 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 OR10AG1Q8NH19 301 aa8.73□□□□□ -1.01
VAMP4-202ENST00000367740 CENPXA8MT69 81 aa8.72□□□□□ -1.01
VAMP4-202ENST00000367740 GCHFRP30047 84 aa8.72□□□□□ -1.01
VAMP4-202ENST00000367740 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
VAMP4-202ENST00000367740 CYCSP99999 105 aaKnown RBP8.72□□□□□ -1.01
VAMP4-202ENST00000367740 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
VAMP4-202ENST00000367740 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
VAMP4-202ENST00000367740 TSPAN13O95857 204 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 S100A5P33763 92 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 GAGE2BQ13066 116 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 FAM162BQ5T6X4 162 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 COX8CQ7Z4L0 72 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 SCGB1C1Q8TD33 95 aa8.71□□□□□ -1.02
VAMP4-202ENST00000367740 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
VAMP4-202ENST00000367740 FOXI1Q12951 378 aa8.7□□□□□ -1.02
VAMP4-202ENST00000367740 LRRC37A5PQ49AS3 106 aa8.7□□□□□ -1.02
VAMP4-202ENST00000367740 SDHCQ99643 169 aaPredicted RBP8.7□□□□□ -1.02
VAMP4-202ENST00000367740 ZNF674Q2M3X9 581 aa8.69□□□□□ -1.02
VAMP4-202ENST00000367740 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
VAMP4-202ENST00000367740 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
VAMP4-202ENST00000367740 SMIM3Q9BZL3 60 aa8.69□□□□□ -1.02
VAMP4-202ENST00000367740 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
VAMP4-202ENST00000367740 UBE2L6O14933 153 aa8.68□□□□□ -1.02
VAMP4-202ENST00000367740 RPL12P30050 165 aaKnown RBP8.68□□□□□ -1.02
VAMP4-202ENST00000367740 SRSF3P84103 164 aaKnown RBP8.68□□□□□ -1.02
VAMP4-202ENST00000367740 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
VAMP4-202ENST00000367740 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 MUC21A0A140T8X8 626 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 NOL3O60936 208 aaKnown RBP8.67□□□□□ -1.02
VAMP4-202ENST00000367740 SIX6O95475 246 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 LINC01547P58512 204 aaPredicted RBP8.67□□□□□ -1.02
VAMP4-202ENST00000367740 DEFA3P59666 94 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 KRTAP11-1Q8IUC1 163 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms