RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 CHAC1Q9BUX1 264 aa14.68□□□□□ -0.06
CHD1L-201ENST00000361293 ANK3Q12955 4377 aaKnown RBP14.68□□□□□ -0.06
CHD1L-201ENST00000361293 PROK1P58294 105 aa14.67□□□□□ -0.06
CHD1L-201ENST00000361293 ODF3L2Q3SX64 289 aa14.67□□□□□ -0.06
CHD1L-201ENST00000361293 CCL24O00175 119 aa14.67□□□□□ -0.06
CHD1L-201ENST00000361293 HIGD1BQ9P298 99 aa14.67□□□□□ -0.06
CHD1L-201ENST00000361293 NACAE9PAV3 2078 aa14.67□□□□□ -0.06
CHD1L-201ENST00000361293 EMP1P54849 157 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 LINC01006Q8NI28 216 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 SPAG8Q99932 426 aaPredicted RBP14.66□□□□□ -0.06
CHD1L-201ENST00000361293 P0DMU3 169 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 FAM231AP0DMU4 169 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 FAM231CP0DMU5 169 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 RIPPLY3P57055 190 aa14.66□□□□□ -0.06
CHD1L-201ENST00000361293 TRPT1Q86TN4 253 aaKnown RBP14.66□□□□□ -0.06
CHD1L-201ENST00000361293 AMMECR1LQ6DCA0 310 aa14.65□□□□□ -0.06
CHD1L-201ENST00000361293 FASNP49327 2511 aaKnown RBP14.65□□□□□ -0.06
CHD1L-201ENST00000361293 FXYD2P54710 66 aa14.65□□□□□ -0.06
CHD1L-201ENST00000361293 IGLV4-69A0A075B6H9 119 aa14.64□□□□□ -0.07
CHD1L-201ENST00000361293 A6NDN8 102 aa14.64□□□□□ -0.07
CHD1L-201ENST00000361293 GCSHP23434 173 aa14.64□□□□□ -0.07
CHD1L-201ENST00000361293 NAA38Q9BRA0 125 aaKnown RBP14.64□□□□□ -0.07
CHD1L-201ENST00000361293 Q9UF83 564 aa14.63□□□□□ -0.07
CHD1L-201ENST00000361293 LINC01587Q99440 93 aa14.63□□□□□ -0.07
CHD1L-201ENST00000361293 C11orf86A6NJI1 115 aa14.62□□□□□ -0.07
CHD1L-201ENST00000361293 C11orf72Q8NBR9 251 aa14.62□□□□□ -0.07
CHD1L-201ENST00000361293 JMJD8Q96S16 334 aa14.62□□□□□ -0.07
CHD1L-201ENST00000361293 OPRPNQ99935 248 aaPredicted RBP14.62□□□□□ -0.07
CHD1L-201ENST00000361293 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
CHD1L-201ENST00000361293 RAB37Q96AX2 223 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 XCL2Q9UBD3 114 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 OR11H12B2RN74 326 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 M0R2P5 195 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 PMVKQ15126 192 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 UFSP1Q6NVU6 142 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 OR11H2Q8NH07 326 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 CST9LQ9H4G1 147 aa14.61□□□□□ -0.07
CHD1L-201ENST00000361293 SETXQ7Z333 2677 aaKnown RBP14.61□□□□□ -0.07
CHD1L-201ENST00000361293 H3BRM9 83 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 ZNF415Q09FC8 603 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 NSUN5P1Q3KNT7 163 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 SMR3AQ99954 134 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 Q6ZSN1 163 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 PRADC1Q9BSG0 188 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 JMJD1CQ15652 2540 aa14.6□□□□□ -0.07
CHD1L-201ENST00000361293 GCN1Q92616 2671 aaKnown RBP14.59□□□□□ -0.07
CHD1L-201ENST00000361293 INSP01308 110 aa14.59□□□□□ -0.07
CHD1L-201ENST00000361293 TMEM141Q96I45 108 aa14.59□□□□□ -0.07
CHD1L-201ENST00000361293 TSSC4Q9Y5U2 329 aaPredicted RBP14.59□□□□□ -0.07
CHD1L-201ENST00000361293 E9PLD3 99 aa14.59□□□□□ -0.07
CHD1L-201ENST00000361293 I3L3M4 83 aa14.59□□□□□ -0.07
CHD1L-201ENST00000361293 RHOHQ15669 191 aa14.58□□□□□ -0.07
CHD1L-201ENST00000361293 OR4C5Q8NGB2 326 aa14.58□□□□□ -0.07
CHD1L-201ENST00000361293 MRPL16Q9NX20 251 aaKnown RBP14.58□□□□□ -0.07
CHD1L-201ENST00000361293 TRAV25A0A0B4J276 109 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 C9orf118A6NHY6 69 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 LINC01549A6NIU2 74 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 H3BUT2 72 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 AZU1P20160 251 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 C16orf95Q9H693 158 aa14.58□□□□□ -0.08
CHD1L-201ENST00000361293 MYMXA0A1B0GTQ4 84 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 K7ERJ3 54 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 CFAP126Q5VTH2 177 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 CEND1Q8N111 149 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 A8MWV9 139 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 STHQ8IWL8 128 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 C20orf203Q8NBC4 194 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 ZNRF2Q8NHG8 242 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 HECTD1Q9ULT8 2610 aa14.57□□□□□ -0.08
CHD1L-201ENST00000361293 IGHV3OR16-12A0A075B7B8 117 aa14.56□□□□□ -0.08
CHD1L-201ENST00000361293 EDA2RQ9HAV5 297 aa14.56□□□□□ -0.08
CHD1L-201ENST00000361293 TM2D2Q9BX73 214 aa14.56□□□□□ -0.08
CHD1L-201ENST00000361293 C1orf158Q8N1D5 194 aa14.55□□□□□ -0.08
CHD1L-201ENST00000361293 LINC00467Q9BRT7 94 aa14.55□□□□□ -0.08
CHD1L-201ENST00000361293 NOTCH3Q9UM47 2321 aa14.55□□□□□ -0.08
CHD1L-201ENST00000361293 CLUHP3Q96NS8 147 aa14.54□□□□□ -0.08
CHD1L-201ENST00000361293 SAP30O75446 220 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 WFDC10AQ9H1F0 79 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 NHP2Q9NX24 153 aaKnown RBP14.53□□□□□ -0.08
CHD1L-201ENST00000361293 ADARB2-AS1A8MUL3 147 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 HILS1P60008 231 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 PIK3CD-AS1Q5SR53 167 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 HIVEP2P31629 2446 aa14.53□□□□□ -0.08
CHD1L-201ENST00000361293 ZNF815PA8K554 130 aa14.52□□□□□ -0.08
CHD1L-201ENST00000361293 TMEM170BQ5T4T1 132 aa14.52□□□□□ -0.08
CHD1L-201ENST00000361293 PHLDA1Q8WV24 401 aaPredicted RBP14.52□□□□□ -0.08
CHD1L-201ENST00000361293 PLEKHB2Q96CS7 222 aa14.52□□□□□ -0.08
CHD1L-201ENST00000361293 HIST1H4GQ99525 98 aa14.52□□□□□ -0.08
CHD1L-201ENST00000361293 TRBV7-3A0A075B6L6 115 aa14.52□□□□□ -0.09
CHD1L-201ENST00000361293 SMIM13P0DJ93 91 aa14.52□□□□□ -0.09
CHD1L-201ENST00000361293 PTH2Q96A98 100 aa14.52□□□□□ -0.09
CHD1L-201ENST00000361293 TNFRSF18Q9Y5U5 241 aa14.52□□□□□ -0.09
CHD1L-201ENST00000361293 IGLV4-3A0A075B6K6 122 aa14.51□□□□□ -0.09
CHD1L-201ENST00000361293 TSPEAR-AS2P59090 65 aa14.51□□□□□ -0.09
CHD1L-201ENST00000361293 BEAN1Q3B7T3 259 aa14.51□□□□□ -0.09
CHD1L-201ENST00000361293 ZNF418Q8TF45 676 aaPredicted RBP14.51□□□□□ -0.09
CHD1L-201ENST00000361293 PAPPA-AS1Q5QFB9 102 aa14.51□□□□□ -0.09
CHD1L-201ENST00000361293 FAM104AQ969W3 186 aa14.51□□□□□ -0.09
CHD1L-201ENST00000361293 SPXQ9BT56 116 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms