RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 WISP1O95388 367 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 TMEM263Q8WUH6 116 aaKnown RBP7.53□□□□□ -1.2
CUX1-203ENST00000360264 TMEM61Q8N0U2 210 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 DEFB136Q30KP8 78 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 CPAMD8Q8IZJ3 1885 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4-30-2A0A087WSY4 118 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
CUX1-203ENST00000360264 K7ERS5 55 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 DUX4L9Q6RFH8 374 aaPredicted RBP7.52□□□□□ -1.21
CUX1-203ENST00000360264 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
CUX1-203ENST00000360264 IGLV11-55A0A075B6I3 123 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 NDUFA11Q86Y39 141 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
CUX1-203ENST00000360264 ODF3Q96PU9 254 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 I3L2K1 104 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 RNF144BQ7Z419 303 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 AGPAT4-IT1Q9H0P7 198 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 C10orf105Q8TEF2 133 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 DKK2Q9UBU2 259 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 MUSTN1Q8IVN3 82 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4-38-2P0DP08 117 aa7.51□□□□□ -1.21
CUX1-203ENST00000360264 TOMM6Q96B49 74 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 APRG1Q8IVJ8 170 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 H0Y9J4 135 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 CTRLP40313 264 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 Q8N1Y9 231 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 PRO0255Q9UI72 69 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 SPRY2O43597 315 aa7.5□□□□□ -1.21
CUX1-203ENST00000360264 KRTAP27-1Q3LI81 207 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4-28A0A0C4DH34 117 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 TRBV12-3P01733 135 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 CTSGP08311 255 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 FGF23Q9GZV9 251 aaPredicted RBP7.49□□□□□ -1.21
CUX1-203ENST00000360264 K7EN84 100 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 H3BT86 120 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 LGALS9O00182 355 aa7.49□□□□□ -1.21
CUX1-203ENST00000360264 C14orf132Q9NPU4 83 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 C11orf45Q8TAV5 145 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 COX7BP24311 80 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 PSMB8P28062 276 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 H7C423 109 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 J3KT08 172 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 DEFB135Q30KP9 77 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 MAJINQ3KP22 176 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 HIGD1BQ9P298 99 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
CUX1-203ENST00000360264 LTBP2Q14767 1821 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 TAX1BP3O14907 124 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 AJUBAQ96IF1 538 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 PCP2Q8IVA1 136 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4OR15-8A0A075B7B6 117 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 A0A087WW49 117 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 IGHV4-61A0A0C4DH41 118 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 NCR3O14931 201 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 TRBV10-2A0A0K0K1G8 114 aa7.47□□□□□ -1.21
CUX1-203ENST00000360264 CTSZQ9UBR2 303 aa7.46□□□□□ -1.21
CUX1-203ENST00000360264 USP17L23D6RBM5 183 aa7.46□□□□□ -1.21
CUX1-203ENST00000360264 C11orf53Q8IXP5 236 aa7.46□□□□□ -1.21
CUX1-203ENST00000360264 LRRC75A-AS1Q8N1F1 130 aa7.46□□□□□ -1.22
CUX1-203ENST00000360264 LYRM9A8MSI8 78 aa7.46□□□□□ -1.22
CUX1-203ENST00000360264 MAP1AP78559 2803 aaPredicted RBP7.46□□□□□ -1.22
CUX1-203ENST00000360264 RNF183Q96D59 192 aa7.46□□□□□ -1.22
CUX1-203ENST00000360264 CFAP46Q8IYW2 2715 aa7.46□□□□□ -1.22
CUX1-203ENST00000360264 Q8N9W7 124 aa7.46□□□□□ -1.22
CUX1-203ENST00000360264 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 LYPD6BQ8NI32 183 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 UPK3BQ9BT76 320 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 C17orf77Q96MU5 243 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 CENPFP49454 3210 aa7.45□□□□□ -1.22
CUX1-203ENST00000360264 KLK12Q9UKR0 248 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 DIAPH2-AS1Q14236 149 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 RSPO1Q2MKA7 263 aaPredicted RBP7.44□□□□□ -1.22
CUX1-203ENST00000360264 MDFICQ9P1T7 246 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
CUX1-203ENST00000360264 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 SS18L2Q9UHA2 77 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 FSTL3O95633 263 aa7.44□□□□□ -1.22
CUX1-203ENST00000360264 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms