RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RPL36ALQ969Q0 106 aaKnown RBP10.61□□□□□ -0.71
TPM1-206ENST00000358278 RNF185Q96GF1 192 aa10.61□□□□□ -0.71
TPM1-206ENST00000358278 Q9UF83 564 aa10.61□□□□□ -0.71
TPM1-206ENST00000358278 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
TPM1-206ENST00000358278 SCO1O75880 301 aa10.61□□□□□ -0.71
TPM1-206ENST00000358278 TRBV7-3A0A075B6L6 115 aa10.6□□□□□ -0.71
TPM1-206ENST00000358278 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
TPM1-206ENST00000358278 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
TPM1-206ENST00000358278 ZNRF2Q8NHG8 242 aa10.6□□□□□ -0.71
TPM1-206ENST00000358278 FRZBQ92765 325 aa10.6□□□□□ -0.71
TPM1-206ENST00000358278 MRAP2Q96G30 205 aa10.6□□□□□ -0.71
TPM1-206ENST00000358278 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
TPM1-206ENST00000358278 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
TPM1-206ENST00000358278 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
TPM1-206ENST00000358278 TNFRSF18Q9Y5U5 241 aa10.59□□□□□ -0.71
TPM1-206ENST00000358278 NCR2O95944 276 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 COX19Q49B96 90 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 TMEM136Q6ZRR5 245 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 NIT2Q9NQR4 276 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 CKS2P33552 79 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 RPL39LQ96EH5 51 aaKnown RBP10.58□□□□□ -0.72
TPM1-206ENST00000358278 DNAJC30Q96LL9 226 aa10.58□□□□□ -0.72
TPM1-206ENST00000358278 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
TPM1-206ENST00000358278 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
TPM1-206ENST00000358278 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
TPM1-206ENST00000358278 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
TPM1-206ENST00000358278 D6R8Y8 96 aa10.56□□□□□ -0.72
TPM1-206ENST00000358278 MT-ND6P03923 174 aa10.56□□□□□ -0.72
TPM1-206ENST00000358278 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
TPM1-206ENST00000358278 YPEL4Q96NS1 127 aa10.56□□□□□ -0.72
TPM1-206ENST00000358278 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 PPP1R17O96001 155 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 CCL18P55774 89 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 UBE2D3P61077 147 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 UBE2D2P62837 147 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 APCSP02743 223 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 PPBPP02775 128 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 RPS10P46783 165 aaKnown RBP10.55□□□□□ -0.72
TPM1-206ENST00000358278 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
TPM1-206ENST00000358278 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
TPM1-206ENST00000358278 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
TPM1-206ENST00000358278 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 ESRGQ1W209 222 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 LYPD5Q6UWN5 251 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
TPM1-206ENST00000358278 MRPL18Q9H0U6 180 aaKnown RBP10.53□□□□□ -0.72
TPM1-206ENST00000358278 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
TPM1-206ENST00000358278 SDHAF1A6NFY7 115 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 NRACQ8N912 160 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
TPM1-206ENST00000358278 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
TPM1-206ENST00000358278 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
TPM1-206ENST00000358278 FABP9Q0Z7S8 132 aa10.52□□□□□ -0.73
TPM1-206ENST00000358278 KIAA1644Q3SXP7 199 aa10.52□□□□□ -0.73
TPM1-206ENST00000358278 NPYP01303 97 aa10.51□□□□□ -0.73
TPM1-206ENST00000358278 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
TPM1-206ENST00000358278 LINC00588Q9Y4M8 146 aa10.51□□□□□ -0.73
TPM1-206ENST00000358278 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
TPM1-206ENST00000358278 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 ALMS1Q8TCU4 4167 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 PHOX2AO14813 284 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 LY6G6CO95867 125 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 TIRAPP58753 221 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
TPM1-206ENST00000358278 COTL1Q14019 142 aa10.49□□□□□ -0.73
TPM1-206ENST00000358278 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
TPM1-206ENST00000358278 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
TPM1-206ENST00000358278 COLCA2A8K830 154 aa10.48□□□□□ -0.73
TPM1-206ENST00000358278 I3L3M4 83 aa10.48□□□□□ -0.73
TPM1-206ENST00000358278 PMCHP20382 165 aa10.48□□□□□ -0.73
TPM1-206ENST00000358278 LELP1Q5T871 98 aa10.48□□□□□ -0.73
TPM1-206ENST00000358278 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
TPM1-206ENST00000358278 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
TPM1-206ENST00000358278 MAP1LC3AQ9H492 121 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 TRBV25-1A0A075B6N4 114 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 TRBV6-8A0A0A6YYG3 113 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 TRBV27A0A0K0K1C4 114 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 VCYO14598 125 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 RAB5AP20339 215 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
TPM1-206ENST00000358278 LOC389332A0A1B0GUA5 103 aa10.46□□□□□ -0.74
TPM1-206ENST00000358278 KIR2DL4Q99706 377 aa10.46□□□□□ -0.74
TPM1-206ENST00000358278 ALKBH7Q9BT30 221 aaPredicted RBP10.46□□□□□ -0.74
TPM1-206ENST00000358278 IGHV1-24A0A0C4DH33 117 aa10.45□□□□□ -0.74
TPM1-206ENST00000358278 FCER1GP30273 86 aa10.45□□□□□ -0.74
TPM1-206ENST00000358278 AMTP48728 403 aa10.45□□□□□ -0.74
TPM1-206ENST00000358278 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
TPM1-206ENST00000358278 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
TPM1-206ENST00000358278 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
TPM1-206ENST00000358278 DNAH1Q9P2D7 4330 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms