RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
LMX1B-201ENST00000355497 INSL3P51460 131 aa11.32□□□□□ -0.6
LMX1B-201ENST00000355497 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
LMX1B-201ENST00000355497 PI4KAP42356 2102 aa11.32□□□□□ -0.6
LMX1B-201ENST00000355497 UNQ9165/PRO28630Q6UXU0 137 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 REG3AQ06141 175 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 UQCRQO14949 82 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
LMX1B-201ENST00000355497 SCXQ7RTU7 201 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 IGLV1-47P01700 117 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
LMX1B-201ENST00000355497 TNRC6BQ9UPQ9 1833 aaKnown RBP11.31□□□□□ -0.6
LMX1B-201ENST00000355497 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 E7EUB6 86 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 NRGNQ92686 78 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 IGLV2-14P01704 120 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 ATP5EP2Q5VTU8 51 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 SPATA12Q7Z6I5 190 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
LMX1B-201ENST00000355497 DAZAP2Q15038 168 aaPredicted RBP11.29□□□□□ -0.6
LMX1B-201ENST00000355497 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 P0DMU3 169 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 ZDBF2Q9HCK1 2354 aa11.29□□□□□ -0.6
LMX1B-201ENST00000355497 A6NDX4 124 aa11.28□□□□□ -0.6
LMX1B-201ENST00000355497 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
LMX1B-201ENST00000355497 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
LMX1B-201ENST00000355497 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
LMX1B-201ENST00000355497 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
LMX1B-201ENST00000355497 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.6
LMX1B-201ENST00000355497 H7C423 109 aa11.27□□□□□ -0.6
LMX1B-201ENST00000355497 EP300Q09472 2414 aaPredicted RBP11.27□□□□□ -0.6
LMX1B-201ENST00000355497 TSC2P49815 1807 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 A0A096LNI7 61 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
LMX1B-201ENST00000355497 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 IGF2-ASQ6U949 168 aa11.27□□□□□ -0.61
LMX1B-201ENST00000355497 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
LMX1B-201ENST00000355497 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
LMX1B-201ENST00000355497 POLEQ07864 2286 aa11.26□□□□□ -0.61
LMX1B-201ENST00000355497 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
LMX1B-201ENST00000355497 Q6ZTI0 123 aa11.26□□□□□ -0.61
LMX1B-201ENST00000355497 TNRC6AQ8NDV7 1962 aaKnown RBP11.25□□□□□ -0.61
LMX1B-201ENST00000355497 SERP1Q9Y6X1 66 aa11.25□□□□□ -0.61
LMX1B-201ENST00000355497 ATP5EP56381 51 aaPredicted RBP11.25□□□□□ -0.61
LMX1B-201ENST00000355497 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
LMX1B-201ENST00000355497 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
LMX1B-201ENST00000355497 A6NED7 52 aa11.25□□□□□ -0.61
LMX1B-201ENST00000355497 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
LMX1B-201ENST00000355497 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 CRYGDP07320 174 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 SLPIP03973 132 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 A0A087WZ39 114 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 HELZP42694 1942 aaKnown RBP11.24□□□□□ -0.61
LMX1B-201ENST00000355497 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
LMX1B-201ENST00000355497 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
LMX1B-201ENST00000355497 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
LMX1B-201ENST00000355497 DOCK10Q96BY6 2186 aa11.22□□□□□ -0.61
LMX1B-201ENST00000355497 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
LMX1B-201ENST00000355497 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.61
LMX1B-201ENST00000355497 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
LMX1B-201ENST00000355497 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.62
LMX1B-201ENST00000355497 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.62
LMX1B-201ENST00000355497 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.62
LMX1B-201ENST00000355497 CDKN2A-AS1Q9UH64 79 aa11.2□□□□□ -0.62
LMX1B-201ENST00000355497 SPTBN1Q01082 2364 aaKnown RBP11.2□□□□□ -0.62
LMX1B-201ENST00000355497 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
LMX1B-201ENST00000355497 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
LMX1B-201ENST00000355497 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
LMX1B-201ENST00000355497 ZNF22P17026 224 aaPredicted RBP11.2□□□□□ -0.62
LMX1B-201ENST00000355497 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
LMX1B-201ENST00000355497 SPRY4Q9C004 299 aa11.19□□□□□ -0.62
LMX1B-201ENST00000355497 CADP27708 2225 aa11.19□□□□□ -0.62
LMX1B-201ENST00000355497 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
LMX1B-201ENST00000355497 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
LMX1B-201ENST00000355497 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
LMX1B-201ENST00000355497 TRIAP1O43715 76 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 HILS1P60008 231 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 ODF3BA8MYP8 253 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 NDUFC1O43677 76 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 SNURFQ9Y675 71 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 TRBV30A0A0K0K1B3 111 aa11.18□□□□□ -0.62
LMX1B-201ENST00000355497 PLXND1Q9Y4D7 1925 aa11.17□□□□□ -0.62
LMX1B-201ENST00000355497 USF3Q68DE3 2245 aa11.17□□□□□ -0.62
LMX1B-201ENST00000355497 RLFQ13129 1914 aa11.17□□□□□ -0.62
LMX1B-201ENST00000355497 DOCK7Q96N67 2140 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms