RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 A0A087WZ39 114 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 MYCNOSP40205 109 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 C2orf16Q68DN1 1984 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 OBSL1O75147 1896 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 C10orf91Q5T1B1 145 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 TMEM263Q8WUH6 116 aaKnown RBP4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 K7EIM0 57 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 CRYGDP07320 174 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 A0A096LNI7 61 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 WFDC2Q14508 124 aa4.47□□□□□ -1.69
SRGAP1-201ENST00000355086 PRO0255Q9UI72 69 aa4.46□□□□□ -1.69
SRGAP1-201ENST00000355086 C5orf56Q8N8D9 126 aa4.46□□□□□ -1.69
SRGAP1-201ENST00000355086 FAM215AQ9Y5M1 114 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 WISP1O95388 367 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 I3L2K1 104 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 PLXNB3Q9ULL4 1909 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 IGLV11-55A0A075B6I3 123 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 E9PLD3 99 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 IGHV1-58A0A0C4DH39 117 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 FXYD2P54710 66 aa4.46□□□□□ -1.7
SRGAP1-201ENST00000355086 TRAV26-1A0A087WT03 109 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM19A1Q7Z5A9 133 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 UBE2D4Q9Y2X8 147 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 C7orf33Q8WU49 177 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 IGKV1-17P01599 117 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 CTSZQ9UBR2 303 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 Q8N9W7 124 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 F8P00451 2351 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 UBE2D1P51668 147 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 WDR90Q96KV7 1748 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 PLXNA3P51805 1871 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 MRPL55Q7Z7F7 128 aaKnown RBP4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 WFDC10BQ8IUB3 73 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 LINC00173Q6ZV60 143 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 H3BT86 120 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 Q6ZUT4 128 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 RITA1Q96K30 269 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 ZFYVE26Q68DK2 2539 aa4.45□□□□□ -1.7
SRGAP1-201ENST00000355086 INSL3P51460 131 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 K7EMT4 169 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 CTSGP08311 255 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 COL4A1P02462 1669 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 NOTCH4Q99466 2003 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 PLA2G2CQ5R387 149 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 PCDH15Q96QU1 1955 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 TEX49A0A1B0GTD5 131 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 HILS1P60008 231 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 FHL1Q13642 323 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 LY6G6EA0A0G2JKS1 128 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 NRGNQ92686 78 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 U3KQA8 63 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 PRAC2D3DTV9 90 aa4.44□□□□□ -1.7
SRGAP1-201ENST00000355086 C1orf147Q96MC9 270 aaPredicted RBP4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 MGAMO43451 1857 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 PLXNA4Q9HCM2 1894 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 UBE2D3P61077 147 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 LINC00269Q8N2A0 174 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 SLX1AQ9BQ83 275 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 SIRPDQ9H106 197 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 CRIPAKQ8N1N5 446 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 MED14OSP0DP75 135 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 KIAA1671Q9BY89 1806 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 C10orf105Q8TEF2 133 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 RSPO1Q2MKA7 263 aaPredicted RBP4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 TRBV10-1A0A0K0K1A3 114 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 ADAMTS9Q9P2N4 1935 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 TET2Q6N021 2002 aaPredicted RBP4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 LYPD6Q86Y78 171 aa4.43□□□□□ -1.7
SRGAP1-201ENST00000355086 MIAQ16674 131 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 DEFB1P60022 68 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 NFE4Q86UQ8 179 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 P0DMU3 169 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 A0A0U1RQV1 116 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 ZSWIM8A7E2V4 1837 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 C11orf53Q8IXP5 236 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 DEFB131BA0A096LNP1 70 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 SDIM1Q6ZPB5 146 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 LYPD6BQ8NI32 183 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 C9orf85Q96MD7 179 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 REG3AQ06141 175 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms