RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 A0A087WW49 117 aa9.87□□□□□ -0.83
IFT88-202ENST00000351808 A0A087WWL8 130 aa9.87□□□□□ -0.83
IFT88-202ENST00000351808 A0A1W2PNU3 283 aaPredicted RBP9.87□□□□□ -0.83
IFT88-202ENST00000351808 MBD3L4A6NDZ8 208 aaPredicted RBP9.87□□□□□ -0.83
IFT88-202ENST00000351808 MBD3L3A6NE82 208 aaPredicted RBP9.87□□□□□ -0.83
IFT88-202ENST00000351808 MBD3L5A6NJ08 208 aaPredicted RBP9.87□□□□□ -0.83
IFT88-202ENST00000351808 DEFB1P60022 68 aa9.87□□□□□ -0.83
IFT88-202ENST00000351808 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
IFT88-202ENST00000351808 RNASE3P12724 160 aaKnown RBP9.86□□□□□ -0.83
IFT88-202ENST00000351808 ZFAND2AQ8N6M9 145 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 GPR179Q6PRD1 2367 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 A8MZ25 164 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 M0R1W7 72 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 TIRAPP58753 221 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 MIAQ16674 131 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 DAND5Q8N907 189 aa9.86□□□□□ -0.83
IFT88-202ENST00000351808 RPL18AQ02543 176 aaKnown RBP9.85□□□□□ -0.83
IFT88-202ENST00000351808 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 FAM27E3Q08E93 113 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 VMO1Q7Z5L0 202 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 C16orf92Q96LL3 132 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 LY6LH3BQJ8 138 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 IGHV1-69P01742 117 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
IFT88-202ENST00000351808 C10orf105Q8TEF2 133 aa9.85□□□□□ -0.83
IFT88-202ENST00000351808 UCNP55089 124 aa9.84□□□□□ -0.83
IFT88-202ENST00000351808 BAALC-AS2P0C853 105 aa9.84□□□□□ -0.83
IFT88-202ENST00000351808 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
IFT88-202ENST00000351808 C20orf173Q96LM9 149 aa9.84□□□□□ -0.83
IFT88-202ENST00000351808 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
IFT88-202ENST00000351808 TRBV27A0A0K0K1C4 114 aa9.83□□□□□ -0.84
IFT88-202ENST00000351808 KAAG1Q9UBP8 84 aa9.83□□□□□ -0.84
IFT88-202ENST00000351808 MRPL53Q96EL3 112 aaKnown RBP9.83□□□□□ -0.84
IFT88-202ENST00000351808 NPBQ8NG41 125 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 BOD1L1Q8NFC6 3051 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 BDP1A6H8Y1 2624 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 IGHV3OR16-10A0A075B7F0 116 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 A0A087WVE0 104 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 NXPH4O95158 308 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 C15orf32Q32M92 178 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 FAM74A4Q5TZK3 123 aa9.82□□□□□ -0.84
IFT88-202ENST00000351808 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
IFT88-202ENST00000351808 DYNLRB1Q9NP97 96 aa9.81□□□□□ -0.84
IFT88-202ENST00000351808 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
IFT88-202ENST00000351808 COX7A2LO14548 114 aa9.81□□□□□ -0.84
IFT88-202ENST00000351808 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
IFT88-202ENST00000351808 MED13LQ71F56 2210 aa9.81□□□□□ -0.84
IFT88-202ENST00000351808 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 CLEC19AQ6UXS0 136 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 F8WDY8 70 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 J3QLI3 93 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 MED14OSP0DP75 135 aa9.8□□□□□ -0.84
IFT88-202ENST00000351808 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
IFT88-202ENST00000351808 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
IFT88-202ENST00000351808 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
IFT88-202ENST00000351808 PIMREGQ9BSJ6 248 aa9.79□□□□□ -0.84
IFT88-202ENST00000351808 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
IFT88-202ENST00000351808 MBD3L2Q8NHZ7 208 aaPredicted RBP9.79□□□□□ -0.84
IFT88-202ENST00000351808 DPM3Q9P2X0 92 aa9.79□□□□□ -0.84
IFT88-202ENST00000351808 F6UB75 175 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 LYNX1G3V0Z9 82 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 LYNX1P0DP58 116 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 Q8N2B8 174 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
IFT88-202ENST00000351808 COL27A1Q8IZC6 1860 aaPredicted RBP9.78□□□□□ -0.84
IFT88-202ENST00000351808 TTC28Q96AY4 2481 aa9.77□□□□□ -0.84
IFT88-202ENST00000351808 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 PFN2P35080 140 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 FHL2Q14192 279 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 FDCSPQ8NFU4 85 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 ITLN2Q8WWU7 325 aaPredicted RBP9.77□□□□□ -0.85
IFT88-202ENST00000351808 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 USP17L23D6RBM5 183 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 MALP21145 153 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 VSIG2Q96IQ7 327 aa9.77□□□□□ -0.85
IFT88-202ENST00000351808 K7ENP7 123 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 ECSCRQ19T08 205 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 LINC01561Q8N1V8 128 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 Q9HAA7 133 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 PRO0628Q9UI54 55 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 CD28P10747 220 aa9.76□□□□□ -0.85
IFT88-202ENST00000351808 PTPRQQ9UMZ3 2332 aa9.75□□□□□ -0.85
IFT88-202ENST00000351808 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
IFT88-202ENST00000351808 RNASE6Q93091 150 aaKnown RBP9.75□□□□□ -0.85
IFT88-202ENST00000351808 CCDC140Q96MF4 163 aa9.75□□□□□ -0.85
IFT88-202ENST00000351808 BSPH1Q075Z2 132 aa9.75□□□□□ -0.85
IFT88-202ENST00000351808 C9orf139Q6ZV77 190 aa9.75□□□□□ -0.85
IFT88-202ENST00000351808 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms