RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 IGF2BP2-AS1Q96M15 143 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 RNF144BQ7Z419 303 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 ZNF833PQ6ZTB9 187 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 TRBV30A0A0K0K1B3 111 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 SPRY4Q9C004 299 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 IGKV1-12A0A0C4DH73 117 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.83□□□□□ -1.64
VCAN-203ENST00000343200 K7EQD1 137 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 IGKV1D-12P01611 117 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 PIP4P2Q8N4L2 257 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 PSPHP1O15172 72 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 TRIAP1O43715 76 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 CD59P13987 128 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 COX7BP24311 80 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 C4orf48Q5BLP8 95 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 IGFBP6P24592 240 aaPredicted RBP4.82□□□□□ -1.64
VCAN-203ENST00000343200 XGP55808 180 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 Q8N976 141 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 ZNF837Q96EG3 531 aaPredicted RBP4.82□□□□□ -1.64
VCAN-203ENST00000343200 PSPNO60542 156 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 NCR3O14931 201 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 Q9HAA7 133 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 RFPL3SP0C7P2 107 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 RNF114Q9Y508 228 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 LIMD2Q9BT23 127 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 MDFICQ9P1T7 246 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 NDUFA1O15239 70 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 UBE2D2P62837 147 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 IGFL4Q6B9Z1 124 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 Q8N9L7 120 aa4.82□□□□□ -1.64
VCAN-203ENST00000343200 CFHR3Q02985 330 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 CLPSP04118 112 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 DEFB124Q8NES8 71 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 A0A0G2JRQ6 117 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 NUPR1O60356 82 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 RSPO4Q2I0M5 234 aaPredicted RBP4.81□□□□□ -1.64
VCAN-203ENST00000343200 CD177Q8N6Q3 437 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 PLA2G2FQ9BZM2 168 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 WFDC10AQ9H1F0 79 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 IGHV3-30-3P0DP02 117 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 NSUN5P1Q3KNT7 163 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 SIRPDQ9H106 197 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 MUC22E2RYF6 1773 aaPredicted RBP4.81□□□□□ -1.64
VCAN-203ENST00000343200 PRYO14603 147 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.81□□□□□ -1.64
VCAN-203ENST00000343200 CAMK2N2Q96S95 79 aa4.81□□□□□ -1.64
VCAN-203ENST00000343200 EIF4EBP2Q13542 120 aaPredicted RBP4.8□□□□□ -1.64
VCAN-203ENST00000343200 TFF1P04155 84 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 LY6DQ14210 128 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 CHD6Q8TD26 2715 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 TRBV10-3A0A0K0K1G6 114 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 C2orf70A6NJV1 201 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 DSCR9P59020 149 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 Q6JHZ5 121 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 APRG1Q8IVJ8 170 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 A8MZ25 164 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 IGHV1-46P01743 117 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 CRYGDP07320 174 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
VCAN-203ENST00000343200 XCL2Q9UBD3 114 aa4.8□□□□□ -1.64
VCAN-203ENST00000343200 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
VCAN-203ENST00000343200 TMEM223A0PJW6 202 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 IGHV7-4-1A0A0J9YVY3 117 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 B9D2Q9BPU9 175 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 PRR19A6NJB7 356 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 SAA4P35542 130 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 GATA4P43694 442 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 MIR7-3HGQ8N6C7 128 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
VCAN-203ENST00000343200 IGKV1D-17A0A075B6S4 117 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 OVOL3O00110 214 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 LINC01565O15544 149 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
VCAN-203ENST00000343200 IGKV2D-24A0A075B6R9 120 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 IGHV4-59P01825 116 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 NOP10Q9NPE3 64 aaKnown RBP4.78□□□□□ -1.64
VCAN-203ENST00000343200 LINC01560Q8TB33 94 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 C9orf85Q96MD7 179 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 TP73-AS1Q9UF72 201 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 J3QLI3 93 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 CCKP06307 115 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 RNASE6Q93091 150 aaKnown RBP4.78□□□□□ -1.64
VCAN-203ENST00000343200 DIAPH2-AS1Q14236 149 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 MRPS12O15235 138 aaKnown RBP4.78□□□□□ -1.64
VCAN-203ENST00000343200 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 SP7Q8TDD2 431 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms