RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 A0A0J9YX75 114 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 DEFB4AO15263 64 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 C9orf153Q5TBE3 101 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
DNMT1-201ENST00000340748 A0A1B0GXF2 115 aa9.77□□□□□ -0.84
DNMT1-201ENST00000340748 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.84
DNMT1-201ENST00000340748 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.84
DNMT1-201ENST00000340748 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 LINC01006Q8NI28 216 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 DSCAMO60469 2012 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 E9PLD3 99 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 SHANK1Q9Y566 2161 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 TDRG1Q3Y452 100 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 IGLV2-8P01709 118 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 Q9HAA7 133 aa9.77□□□□□ -0.85
DNMT1-201ENST00000340748 CRYGBP07316 175 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 CCL25O15444 150 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 C11orf45Q8TAV5 145 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 C1orf43Q9BWL3 253 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 H0YGX0 51 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 COX7A2LO14548 114 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 HAMPP81172 84 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 NUP210LQ5VU65 1888 aa9.76□□□□□ -0.85
DNMT1-201ENST00000340748 IGF1P05019 195 aa9.75□□□□□ -0.85
DNMT1-201ENST00000340748 ACYP1P07311 99 aa9.75□□□□□ -0.85
DNMT1-201ENST00000340748 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
DNMT1-201ENST00000340748 C1orf229Q6ZS94 237 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-201ENST00000340748 ANKRD29Q8N6D5 301 aa9.75□□□□□ -0.85
DNMT1-201ENST00000340748 TRAV4A0A0B4J268 109 aa9.75□□□□□ -0.85
DNMT1-201ENST00000340748 PIEZO2Q9H5I5 2752 aa9.75□□□□□ -0.85
DNMT1-201ENST00000340748 FRMD6-AS1P0C7T7 363 aa9.74□□□□□ -0.85
DNMT1-201ENST00000340748 ODF1Q14990 250 aa9.74□□□□□ -0.85
DNMT1-201ENST00000340748 A4D1N5 150 aa9.74□□□□□ -0.85
DNMT1-201ENST00000340748 EBI3Q14213 229 aa9.74□□□□□ -0.85
DNMT1-201ENST00000340748 HHLA3Q9XRX5 114 aa9.74□□□□□ -0.85
DNMT1-201ENST00000340748 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 ESM1Q9NQ30 184 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 LGALS9O00182 355 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 TMEM263Q8WUH6 116 aaKnown RBP9.73□□□□□ -0.85
DNMT1-201ENST00000340748 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 ARFGEF3Q5TH69 2177 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
DNMT1-201ENST00000340748 H3BQ85 93 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 TMEM61Q8N0U2 210 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 C20orf203Q8NBC4 194 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 CXCL5P42830 114 aa9.72□□□□□ -0.85
DNMT1-201ENST00000340748 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-201ENST00000340748 FXYD2P54710 66 aa9.71□□□□□ -0.85
DNMT1-201ENST00000340748 DEFB1P60022 68 aa9.71□□□□□ -0.85
DNMT1-201ENST00000340748 CITED1Q99966 193 aa9.71□□□□□ -0.85
DNMT1-201ENST00000340748 FAM110AQ9BQ89 295 aa9.71□□□□□ -0.85
DNMT1-201ENST00000340748 SPTBN4Q9H254 2564 aa9.71□□□□□ -0.85
DNMT1-201ENST00000340748 DYSFO75923 2080 aa9.7□□□□□ -0.86
DNMT1-201ENST00000340748 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-201ENST00000340748 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
DNMT1-201ENST00000340748 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
DNMT1-201ENST00000340748 NOTCH3Q9UM47 2321 aa9.7□□□□□ -0.86
DNMT1-201ENST00000340748 LINC01548A6NM66 108 aa9.69□□□□□ -0.86
DNMT1-201ENST00000340748 TAX1BP3O14907 124 aa9.69□□□□□ -0.86
DNMT1-201ENST00000340748 NDUFA7O95182 113 aa9.69□□□□□ -0.86
DNMT1-201ENST00000340748 UBE2BP63146 152 aa9.69□□□□□ -0.86
DNMT1-201ENST00000340748 LY6G6CO95867 125 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 RPL18AQ02543 176 aaKnown RBP9.68□□□□□ -0.86
DNMT1-201ENST00000340748 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
DNMT1-201ENST00000340748 NDUFA1O15239 70 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 CRYBA4P53673 196 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 TTTY13Q9BZ97 58 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 TRACP01848 142 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 LINC00482Q8N8I6 264 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 CHD3Q12873 2000 aaKnown RBP9.67□□□□□ -0.86
DNMT1-201ENST00000340748 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
DNMT1-201ENST00000340748 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
DNMT1-201ENST00000340748 K7EQG2 157 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms