RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
SEC13-201ENST00000337354 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 MRPL54Q6P161 138 aaKnown RBP10.63□□□□□ -0.71
SEC13-201ENST00000337354 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
SEC13-201ENST00000337354 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 Q9UF83 564 aa10.63□□□□□ -0.71
SEC13-201ENST00000337354 PLECQ15149 4684 aaKnown RBP10.62□□□□□ -0.71
SEC13-201ENST00000337354 SACSQ9NZJ4 4579 aa10.62□□□□□ -0.71
SEC13-201ENST00000337354 RAB4AP20338 218 aa10.62□□□□□ -0.71
SEC13-201ENST00000337354 NEXN-AS1Q8NBZ9 246 aa10.62□□□□□ -0.71
SEC13-201ENST00000337354 NIT2Q9NQR4 276 aa10.62□□□□□ -0.71
SEC13-201ENST00000337354 LINC00588Q9Y4M8 146 aa10.62□□□□□ -0.71
SEC13-201ENST00000337354 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
SEC13-201ENST00000337354 UBE2D3P61077 147 aa10.6□□□□□ -0.71
SEC13-201ENST00000337354 UBE2D2P62837 147 aa10.6□□□□□ -0.71
SEC13-201ENST00000337354 DAZ4Q86SG3 579 aaKnown RBP10.6□□□□□ -0.71
SEC13-201ENST00000337354 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
SEC13-201ENST00000337354 DAZ3Q9NR90 486 aaKnown RBP10.6□□□□□ -0.71
SEC13-201ENST00000337354 MRPS16Q9Y3D3 137 aaKnown RBP10.6□□□□□ -0.71
SEC13-201ENST00000337354 PPP1R17O96001 155 aa10.59□□□□□ -0.71
SEC13-201ENST00000337354 TMEM97Q5BJF2 176 aa10.58□□□□□ -0.72
SEC13-201ENST00000337354 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
SEC13-201ENST00000337354 LELP1Q5T871 98 aa10.57□□□□□ -0.72
SEC13-201ENST00000337354 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
SEC13-201ENST00000337354 HYDINQ4G0P3 5121 aa10.57□□□□□ -0.72
SEC13-201ENST00000337354 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
SEC13-201ENST00000337354 PPBPP02775 128 aa10.56□□□□□ -0.72
SEC13-201ENST00000337354 COX19Q49B96 90 aa10.56□□□□□ -0.72
SEC13-201ENST00000337354 MRPL51Q4U2R6 128 aaKnown RBP10.56□□□□□ -0.72
SEC13-201ENST00000337354 Q9H8V8 135 aa10.56□□□□□ -0.72
SEC13-201ENST00000337354 NACAE9PAV3 2078 aa10.56□□□□□ -0.72
SEC13-201ENST00000337354 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
SEC13-201ENST00000337354 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
SEC13-201ENST00000337354 CKS2P33552 79 aa10.54□□□□□ -0.72
SEC13-201ENST00000337354 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
SEC13-201ENST00000337354 SIVA1O15304 175 aa10.53□□□□□ -0.72
SEC13-201ENST00000337354 ATRAIDQ6UW56 229 aa10.53□□□□□ -0.72
SEC13-201ENST00000337354 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
SEC13-201ENST00000337354 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
SEC13-201ENST00000337354 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
SEC13-201ENST00000337354 TRBV24-1A0A075B6N3 115 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 K7EP13 123 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 ELOBQ15370 118 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.72
SEC13-201ENST00000337354 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 PHOX2AO14813 284 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 NRACQ8N912 160 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
SEC13-201ENST00000337354 TRAV9-2A0A087WT02 112 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 D6R8Y8 96 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 I3L3M4 83 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 MT-ND6P03923 174 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 RPS10P46783 165 aaKnown RBP10.51□□□□□ -0.73
SEC13-201ENST00000337354 POLR2KP53803 58 aaKnown RBP10.51□□□□□ -0.73
SEC13-201ENST00000337354 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
SEC13-201ENST00000337354 VCYO14598 125 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 NCR2O95944 276 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 PMCHP20382 165 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 SUMO2P61956 95 aaKnown RBP10.5□□□□□ -0.73
SEC13-201ENST00000337354 COTL1Q14019 142 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
SEC13-201ENST00000337354 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 IGHV1-24A0A0C4DH33 117 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 TRBV27A0A0K0K1C4 114 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 NBDYA0A0U1RRE5 68 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 APCSP02743 223 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 PKIAP61925 76 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 RPL32P62910 135 aaKnown RBP10.49□□□□□ -0.73
SEC13-201ENST00000337354 IQCJQ1A5X6 159 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 LINC01556Q5JQF7 62 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
SEC13-201ENST00000337354 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
SEC13-201ENST00000337354 TGIF2-C20orf24A0A0A6YYL0 155 aa10.48□□□□□ -0.73
SEC13-201ENST00000337354 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
SEC13-201ENST00000337354 BTF3P20290 206 aaKnown RBP10.47□□□□□ -0.73
SEC13-201ENST00000337354 Q6ZR54 194 aa10.47□□□□□ -0.73
SEC13-201ENST00000337354 NIT1Q86X76 327 aa10.47□□□□□ -0.73
SEC13-201ENST00000337354 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
SEC13-201ENST00000337354 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms