RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 TMEM263Q8WUH6 116 aaKnown RBP7.51□□□□□ -1.21
COL4A6-201ENST00000334504 FRMPD3Q5JV73 1810 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 MED12Q93074 2177 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 HRCT1Q6UXD1 115 aa7.51□□□□□ -1.21
COL4A6-201ENST00000334504 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 CCL24O00175 119 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 J3QLI3 93 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 DEFB4AO15263 64 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 P0DMU3 169 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 FAM231AP0DMU4 169 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 FAM231CP0DMU5 169 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 CENPVL3A0A0U1RRI6 287 aa7.5□□□□□ -1.21
COL4A6-201ENST00000334504 DEFB112Q30KQ8 113 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 COX7CP15954 63 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 IGLV2-8P01709 118 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 XGP55808 180 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 LINC00322Q6ZN03 302 aaPredicted RBP7.49□□□□□ -1.21
COL4A6-201ENST00000334504 WFDC10BQ8IUB3 73 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 PRR15LQ9BU68 103 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 C11orf1Q9H5F2 150 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 K7ERS5 55 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 NDUFC1O43677 76 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
COL4A6-201ENST00000334504 BLCAPP62952 87 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 IMUPQ9GZP8 106 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 DOCK8Q8NF50 2099 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 TRBV30A0A0K0K1B3 111 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 A0A0J9YWU9 116 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 EML6Q6ZMW3 1958 aa7.48□□□□□ -1.21
COL4A6-201ENST00000334504 YPEL4Q96NS1 127 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 VPREB3Q9UKI3 123 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 ZNF80P51504 273 aaPredicted RBP7.47□□□□□ -1.21
COL4A6-201ENST00000334504 DOCK10Q96BY6 2186 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 E7EUB6 86 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 TP53TG3Q9ULZ0 132 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 PRR4Q16378 134 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 IGHV4-30-2A0A087WSY4 118 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 WT1P19544 449 aaPredicted RBP7.47□□□□□ -1.21
COL4A6-201ENST00000334504 KRTAP27-1Q3LI81 207 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 KLK12Q9UKR0 248 aa7.47□□□□□ -1.21
COL4A6-201ENST00000334504 SIRPDQ9H106 197 aa7.46□□□□□ -1.21
COL4A6-201ENST00000334504 FNDC1Q4ZHG4 1894 aaPredicted RBP7.46□□□□□ -1.21
COL4A6-201ENST00000334504 CADP27708 2225 aa7.46□□□□□ -1.21
COL4A6-201ENST00000334504 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
COL4A6-201ENST00000334504 DEFB113Q30KQ7 82 aa7.46□□□□□ -1.22
COL4A6-201ENST00000334504 CCL18P55774 89 aa7.46□□□□□ -1.22
COL4A6-201ENST00000334504 SIP14410 1827 aa7.46□□□□□ -1.22
COL4A6-201ENST00000334504 INSL3P51460 131 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 LINC00308Q8TCZ7 52 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 PLXNA3P51805 1871 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 KLK5Q9Y337 293 aaPredicted RBP7.45□□□□□ -1.22
COL4A6-201ENST00000334504 TSC2P49815 1807 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 B9D2Q9BPU9 175 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 FAM215AQ9Y5M1 114 aa7.45□□□□□ -1.22
COL4A6-201ENST00000334504 ZNF22P17026 224 aaPredicted RBP7.45□□□□□ -1.22
COL4A6-201ENST00000334504 Q8N9W7 124 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 WDR81Q562E7 1941 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 C2orf91Q6ZV80 131 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 RNF138Q8WVD3 245 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 NBASA2RRP1 2371 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 THSD7BQ9C0I4 1608 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 IGHV4-38-2P0DP08 117 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 ODF3L1Q8IXM7 274 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 Q6ZSR3 168 aa7.44□□□□□ -1.22
COL4A6-201ENST00000334504 C5orf56Q8N8D9 126 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 LINC00467Q9BRT7 94 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 RETNQ9HD89 108 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 CDKN2A-AS1Q9UH64 79 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 IGKV1D-37A0A075B6S9 117 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
COL4A6-201ENST00000334504 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 PLXNA4Q9HCM2 1894 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 PLXND1Q9Y4D7 1925 aa7.43□□□□□ -1.22
COL4A6-201ENST00000334504 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 SPRY4Q9C004 299 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 A0A096LNI7 61 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 ABCA1O95477 2261 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 Q6Q795 121 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 MBD6Q96DN6 1003 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 LY6G6EA0A0G2JKS1 128 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 U3KQA8 63 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 KIAA1671Q9BY89 1806 aa7.42□□□□□ -1.22
COL4A6-201ENST00000334504 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 K7EMT4 169 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 FAM30AQ9NZY2 134 aa7.41□□□□□ -1.22
COL4A6-201ENST00000334504 SPTAN1Q13813 2472 aaKnown RBP7.41□□□□□ -1.22
COL4A6-201ENST00000334504 LYRM9A8MSI8 78 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms