RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 LINC01619G3V211 115 aa13.94□□□□□ -0.18
RFTN1-201ENST00000334133 CEND1Q8N111 149 aa13.94□□□□□ -0.18
RFTN1-201ENST00000334133 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
RFTN1-201ENST00000334133 Q9UF83 564 aa13.93□□□□□ -0.18
RFTN1-201ENST00000334133 CST9LQ9H4G1 147 aa13.93□□□□□ -0.18
RFTN1-201ENST00000334133 HELZ2Q9BYK8 2649 aaKnown RBP13.92□□□□□ -0.18
RFTN1-201ENST00000334133 IGIPA6NJ69 53 aa13.92□□□□□ -0.18
RFTN1-201ENST00000334133 C2CD3Q4AC94 2353 aa13.92□□□□□ -0.18
RFTN1-201ENST00000334133 RNF152Q8N8N0 203 aa13.92□□□□□ -0.18
RFTN1-201ENST00000334133 DYNLRB2Q8TF09 96 aa13.92□□□□□ -0.18
RFTN1-201ENST00000334133 MYMXA0A1B0GTQ4 84 aa13.91□□□□□ -0.18
RFTN1-201ENST00000334133 A0A1W2PPM0 123 aa13.91□□□□□ -0.18
RFTN1-201ENST00000334133 SCGB2A2Q13296 93 aa13.91□□□□□ -0.18
RFTN1-201ENST00000334133 SAMD5Q5TGI4 173 aa13.91□□□□□ -0.18
RFTN1-201ENST00000334133 SPCS1Q9Y6A9 102 aa13.91□□□□□ -0.18
RFTN1-201ENST00000334133 IGLV4-69A0A075B6H9 119 aa13.9□□□□□ -0.18
RFTN1-201ENST00000334133 H3BMM0 161 aa13.9□□□□□ -0.18
RFTN1-201ENST00000334133 PLEKHB2Q96CS7 222 aa13.9□□□□□ -0.18
RFTN1-201ENST00000334133 RBX1P62877 108 aa13.9□□□□□ -0.18
RFTN1-201ENST00000334133 ZNF815PA8K554 130 aa13.89□□□□□ -0.19
RFTN1-201ENST00000334133 TMEM170BQ5T4T1 132 aa13.89□□□□□ -0.19
RFTN1-201ENST00000334133 TRBV27A0A0K0K1C4 114 aa13.89□□□□□ -0.19
RFTN1-201ENST00000334133 Q6ZSV7 163 aa13.89□□□□□ -0.19
RFTN1-201ENST00000334133 SETXQ7Z333 2677 aaKnown RBP13.89□□□□□ -0.19
RFTN1-201ENST00000334133 UFSP1Q6NVU6 142 aa13.89□□□□□ -0.19
RFTN1-201ENST00000334133 SCGB1D4Q6XE38 83 aa13.88□□□□□ -0.19
RFTN1-201ENST00000334133 K7EP34 96 aa13.88□□□□□ -0.19
RFTN1-201ENST00000334133 PMVKQ15126 192 aa13.88□□□□□ -0.19
RFTN1-201ENST00000334133 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
RFTN1-201ENST00000334133 TM2D2Q9BX73 214 aa13.88□□□□□ -0.19
RFTN1-201ENST00000334133 ZNRF2Q8NHG8 242 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 MAP6D1Q9H9H5 199 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 IGHV3-64A0A075B6Q5 118 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 IGHV3OR16-12A0A075B7B8 117 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 E9PLD3 99 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 SAP30O75446 220 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 C21orf62-AS1Q17RA5 79 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
RFTN1-201ENST00000334133 C4orf3Q8WVX3 66 aa13.87□□□□□ -0.19
RFTN1-201ENST00000334133 NOTCH2Q04721 2471 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 TRGV11A0A075B6L2 103 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 OCIAD2Q56VL3 154 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 Q8N2B8 174 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 DNAJC9-AS1A6NH13 148 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 FABP2P12104 132 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 TRPT1Q86TN4 253 aaKnown RBP13.86□□□□□ -0.19
RFTN1-201ENST00000334133 ESM1Q9NQ30 184 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 CEMP1Q6PRD7 247 aaPredicted RBP13.86□□□□□ -0.19
RFTN1-201ENST00000334133 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
RFTN1-201ENST00000334133 PDZD2O15018 2839 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
RFTN1-201ENST00000334133 Q6ZSN1 163 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 LINC01587Q99440 93 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
RFTN1-201ENST00000334133 XCL2Q9UBD3 114 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 TRBV6-5A0A0K0K1A5 114 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 C12orf74Q32Q52 190 aa13.85□□□□□ -0.19
RFTN1-201ENST00000334133 TSPEAR-AS2P59090 65 aa13.84□□□□□ -0.19
RFTN1-201ENST00000334133 RPL32P62910 135 aaKnown RBP13.84□□□□□ -0.19
RFTN1-201ENST00000334133 DEFB114Q30KQ6 69 aa13.84□□□□□ -0.19
RFTN1-201ENST00000334133 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
RFTN1-201ENST00000334133 SFTA2Q6UW10 78 aa13.84□□□□□ -0.19
RFTN1-201ENST00000334133 MRPL16Q9NX20 251 aaKnown RBP13.84□□□□□ -0.19
RFTN1-201ENST00000334133 RAX2Q96IS3 184 aa13.83□□□□□ -0.19
RFTN1-201ENST00000334133 RIPPLY3P57055 190 aa13.83□□□□□ -0.2
RFTN1-201ENST00000334133 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
RFTN1-201ENST00000334133 CD28P10747 220 aa13.82□□□□□ -0.2
RFTN1-201ENST00000334133 SRSF9Q13242 221 aaKnown RBP eCLIP13.82□□□□□ -0.2
RFTN1-201ENST00000334133 MTURNQ8N3F0 131 aa13.82□□□□□ -0.2
RFTN1-201ENST00000334133 CBY1Q9Y3M2 126 aa13.82□□□□□ -0.2
RFTN1-201ENST00000334133 I3L3M4 83 aa13.82□□□□□ -0.2
RFTN1-201ENST00000334133 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
RFTN1-201ENST00000334133 IGHV3-38A0A0C4DH36 116 aa13.81□□□□□ -0.2
RFTN1-201ENST00000334133 TMEM141Q96I45 108 aa13.81□□□□□ -0.2
RFTN1-201ENST00000334133 IGLL5B9A064 214 aa13.81□□□□□ -0.2
RFTN1-201ENST00000334133 C20orf203Q8NBC4 194 aa13.81□□□□□ -0.2
RFTN1-201ENST00000334133 AZU1P20160 251 aa13.8□□□□□ -0.2
RFTN1-201ENST00000334133 ZNF479Q96JC4 524 aa13.8□□□□□ -0.2
RFTN1-201ENST00000334133 VPS25Q9BRG1 176 aa13.8□□□□□ -0.2
RFTN1-201ENST00000334133 A0A0J9YXV3 536 aa13.79□□□□□ -0.2
RFTN1-201ENST00000334133 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
RFTN1-201ENST00000334133 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 NSUN5P1Q3KNT7 163 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 CITED2Q99967 270 aaPredicted RBP13.78□□□□□ -0.2
RFTN1-201ENST00000334133 M0R2P5 195 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 HERVK_113P61574 105 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 TNFRSF18Q9Y5U5 241 aa13.78□□□□□ -0.2
RFTN1-201ENST00000334133 TAL2Q16559 108 aa13.77□□□□□ -0.2
RFTN1-201ENST00000334133 APOMO95445 188 aa13.77□□□□□ -0.21
RFTN1-201ENST00000334133 YAE1D1Q9NRH1 226 aa13.77□□□□□ -0.21
RFTN1-201ENST00000334133 IGLV4-3A0A075B6K6 122 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 H3BMG7 143 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 CCL24O00175 119 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 ZNF415Q09FC8 603 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 RHOHQ15669 191 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 CFAP126Q5VTH2 177 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 VCX2Q9H322 139 aa13.76□□□□□ -0.21
RFTN1-201ENST00000334133 PCP4P48539 62 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms