RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
ATP2C1-201ENST00000328560 M0QY20 66 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 SLURP1P55000 103 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 DEFB131AP59861 70 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 P0DMU3 169 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 NACAE9PAV3 2078 aa10.4□□□□□ -0.74
ATP2C1-201ENST00000328560 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 TMEM89A2RUT3 159 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 LGALS9O00182 355 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 TSPEAR-AS2P59090 65 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 PROK1P58294 105 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 POM121L12Q8N7R1 296 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 Q96MF0 132 aa10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 BBC3Q96PG8 261 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-201ENST00000328560 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 A0A1B0GWB2 263 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 PSMB2P49721 201 aa10.38□□□□□ -0.75
ATP2C1-201ENST00000328560 MXRA5Q9NR99 2828 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 RNASE13Q5GAN3 156 aaKnown RBP10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 ZNF843Q8N446 348 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 Q6YL49 198 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 UBE2E2Q96LR5 201 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 A0A0J9YY99 117 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 F8W1H4 67 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 ZNF580Q9UK33 172 aa10.37□□□□□ -0.75
ATP2C1-201ENST00000328560 J3QQQ9 107 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 KRTAP10-9P60411 292 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 H7C2G1 150 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 GTSF1LQ9H1H1 148 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 VCX2Q9H322 139 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 TEX15Q9BXT5 2789 aa10.36□□□□□ -0.75
ATP2C1-201ENST00000328560 SPANXB1Q9NS25 103 aaPredicted RBP10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 CUBNO60494 3623 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 TSSC4Q9Y5U2 329 aaPredicted RBP10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 PRRC2AP48634 2157 aaKnown RBP10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 TRGV11A0A075B6L2 103 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 I3L3M4 83 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 C11orf44Q8N8P7 122 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
ATP2C1-201ENST00000328560 FBN2P35556 2912 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 ADARB2-AS1A8MUL3 147 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 INSL3P51460 131 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 Q9UF83 564 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 TRAV2A0A0B4J234 112 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 LINC01619G3V211 115 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 TSPAN13O95857 204 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 SCGB1C2P0DMR2 95 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 C20orf203Q8NBC4 194 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 SPXQ9BT56 116 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
ATP2C1-201ENST00000328560 J3QR89 54 aa10.33□□□□□ -0.76
ATP2C1-201ENST00000328560 CD28P10747 220 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 SPAG8Q99932 426 aaPredicted RBP10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 TNFRSF18Q9Y5U5 241 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 IGHV3OR16-12A0A075B7B8 117 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 RAX2Q96IS3 184 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 SMAGPQ0VAQ4 97 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 RHOHQ15669 191 aa10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
ATP2C1-201ENST00000328560 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 UBE2D1P51668 147 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 NDUFA11Q86Y39 141 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 LINC01587Q99440 93 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 A0A096LNT2 108 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 PTH2Q96A98 100 aa10.31□□□□□ -0.76
ATP2C1-201ENST00000328560 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 CFC1P0CG37 223 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 A0A1W2PRX2 142 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 RBMY1BA6NDE4 496 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms