RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 DEFB4AO15263 64 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 WFDC2Q14508 124 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 ATXN8Q156A1 80 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 CFAP47Q6ZTR5 3102 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
CLIP4-201ENST00000320081 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.4
CLIP4-201ENST00000320081 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.4
CLIP4-201ENST00000320081 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.4
CLIP4-201ENST00000320081 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
CLIP4-201ENST00000320081 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
CLIP4-201ENST00000320081 TMEM86BQ8N661 226 aa12.58□□□□□ -0.4
CLIP4-201ENST00000320081 C5orf38Q86SI9 138 aa12.57□□□□□ -0.4
CLIP4-201ENST00000320081 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
CLIP4-201ENST00000320081 ELANEP08246 267 aa12.57□□□□□ -0.4
CLIP4-201ENST00000320081 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
CLIP4-201ENST00000320081 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
CLIP4-201ENST00000320081 ODF1Q14990 250 aa12.56□□□□□ -0.4
CLIP4-201ENST00000320081 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-201ENST00000320081 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 CCL24O00175 119 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 LGALS1P09382 135 aaKnown RBP12.55□□□□□ -0.4
CLIP4-201ENST00000320081 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 C11orf86A6NJI1 115 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 CTRLP40313 264 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
CLIP4-201ENST00000320081 SPATA12Q7Z6I5 190 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
CLIP4-201ENST00000320081 RHODO00212 210 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 XCL1P47992 114 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 PTH2Q96A98 100 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 IGKV2D-26A0A0A0MRZ7 120 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 HIST1H4AP62805 103 aaKnown RBP12.54□□□□□ -0.4
CLIP4-201ENST00000320081 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 GAGE2AQ6NT46 116 aa12.54□□□□□ -0.4
CLIP4-201ENST00000320081 IGHG2P01859 326 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 NTN5Q8WTR8 489 aaPredicted RBP12.53□□□□□ -0.4
CLIP4-201ENST00000320081 Q9H8V8 135 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 A4D1N5 150 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 ODF3BA8MYP8 253 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 CRYGBP07316 175 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 A0A1W2PPR1 153 aa12.53□□□□□ -0.4
CLIP4-201ENST00000320081 EXPH5Q8NEV8 1989 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 LEPROTO15243 131 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
CLIP4-201ENST00000320081 IGLL5B9A064 214 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 CPAMD8Q8IZJ3 1885 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 BAALCQ8WXS3 180 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 LAMTOR3Q9UHA4 124 aa12.51□□□□□ -0.41
CLIP4-201ENST00000320081 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
CLIP4-201ENST00000320081 BOD1L2Q8IYS8 172 aa12.5□□□□□ -0.41
CLIP4-201ENST00000320081 SLC25A20O43772 301 aa12.5□□□□□ -0.41
CLIP4-201ENST00000320081 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
CLIP4-201ENST00000320081 GAGE12HA6NDE8 117 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 EDN2P20800 178 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 ADAMTS20P59510 1910 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 MYCNOSP40205 109 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 DEFB113Q30KQ7 82 aa12.49□□□□□ -0.41
CLIP4-201ENST00000320081 DAD1P61803 113 aa12.48□□□□□ -0.41
CLIP4-201ENST00000320081 MUSTN1Q8IVN3 82 aa12.48□□□□□ -0.41
CLIP4-201ENST00000320081 ZNF48Q96MX3 618 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-201ENST00000320081 PROK1P58294 105 aa12.48□□□□□ -0.41
CLIP4-201ENST00000320081 IGLC6P0CF74 106 aa12.47□□□□□ -0.41
CLIP4-201ENST00000320081 PRR9Q5T870 116 aa12.47□□□□□ -0.41
CLIP4-201ENST00000320081 ZFAND3Q9H8U3 227 aa12.47□□□□□ -0.41
CLIP4-201ENST00000320081 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
CLIP4-201ENST00000320081 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.41
CLIP4-201ENST00000320081 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.42
CLIP4-201ENST00000320081 CFC1BP0CG36 223 aa12.46□□□□□ -0.42
CLIP4-201ENST00000320081 CFC1P0CG37 223 aa12.46□□□□□ -0.42
CLIP4-201ENST00000320081 SS18Q15532 418 aa12.46□□□□□ -0.42
CLIP4-201ENST00000320081 CARD19Q96LW7 228 aa12.46□□□□□ -0.42
CLIP4-201ENST00000320081 Q8N976 141 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 F8W1H4 67 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 J3QLI3 93 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 C3orf56Q8N813 242 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 A0A0J9YX75 114 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 A6NDX4 124 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 H3BUA1 57 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
CLIP4-201ENST00000320081 MUC3AQ02505 3323 aa12.44□□□□□ -0.42
CLIP4-201ENST00000320081 SIVA1O15304 175 aa12.44□□□□□ -0.42
CLIP4-201ENST00000320081 H3BMM0 161 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 J3QKU1 62 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 ZNF292O60281 2723 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 TNRC6BQ9UPQ9 1833 aaKnown RBP12.43□□□□□ -0.42
CLIP4-201ENST00000320081 AVPP01185 164 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms