RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 BLCAPP62952 87 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 TOMM6Q96B49 74 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 MDFICQ9P1T7 246 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 CHD6Q8TD26 2715 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
PABPC1-201ENST00000318607 CLEC2BQ92478 149 aa10.72□□□□□ -0.69
PABPC1-201ENST00000318607 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
PABPC1-201ENST00000318607 IGHV3OR16-12A0A075B7B8 117 aa10.72□□□□□ -0.69
PABPC1-201ENST00000318607 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
PABPC1-201ENST00000318607 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.69
PABPC1-201ENST00000318607 PMVKQ15126 192 aa10.71□□□□□ -0.69
PABPC1-201ENST00000318607 TAL2Q16559 108 aa10.71□□□□□ -0.69
PABPC1-201ENST00000318607 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.7
PABPC1-201ENST00000318607 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.7
PABPC1-201ENST00000318607 CCDC179H3BU77 68 aa10.71□□□□□ -0.7
PABPC1-201ENST00000318607 PROK1P58294 105 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 CRYGDP07320 174 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
PABPC1-201ENST00000318607 FAM110DQ8TAY7 271 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-201ENST00000318607 TSHBP01222 138 aa10.69□□□□□ -0.7
PABPC1-201ENST00000318607 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
PABPC1-201ENST00000318607 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
PABPC1-201ENST00000318607 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
PABPC1-201ENST00000318607 MAPK1IP1LQ8NDC0 245 aa10.68□□□□□ -0.7
PABPC1-201ENST00000318607 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
PABPC1-201ENST00000318607 RNASE3P12724 160 aaKnown RBP10.68□□□□□ -0.7
PABPC1-201ENST00000318607 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
PABPC1-201ENST00000318607 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
PABPC1-201ENST00000318607 H3BUX3 64 aa10.67□□□□□ -0.7
PABPC1-201ENST00000318607 CD28P10747 220 aa10.67□□□□□ -0.7
PABPC1-201ENST00000318607 Q9UF83 564 aa10.67□□□□□ -0.7
PABPC1-201ENST00000318607 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
PABPC1-201ENST00000318607 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 A0A1W2PPR1 153 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 Q8N1Y9 231 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 VCYO14598 125 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
PABPC1-201ENST00000318607 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
PABPC1-201ENST00000318607 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
PABPC1-201ENST00000318607 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.7
PABPC1-201ENST00000318607 UBE2D1P51668 147 aa10.65□□□□□ -0.7
PABPC1-201ENST00000318607 TCTEX1D4Q5JR98 221 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-201ENST00000318607 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-201ENST00000318607 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 NPFFO15130 113 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE5Q13069 117 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE6Q13070 117 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 LY6G5BQ8NDX9 201 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 PIFOQ8TCI5 191 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 CENPVL3A0A0U1RRI6 287 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 M0R1W7 72 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 DGAT2L7PQ6IED9 249 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
PABPC1-201ENST00000318607 LY6DQ14210 128 aa10.63□□□□□ -0.71
PABPC1-201ENST00000318607 GPHB5Q86YW7 130 aa10.63□□□□□ -0.71
PABPC1-201ENST00000318607 MINOS1Q5TGZ0 78 aa10.63□□□□□ -0.71
PABPC1-201ENST00000318607 ANKRD17O75179 2603 aaKnown RBP10.63□□□□□ -0.71
PABPC1-201ENST00000318607 UBE2E1P51965 193 aa10.63□□□□□ -0.71
PABPC1-201ENST00000318607 C5orf47Q569G3 176 aa10.62□□□□□ -0.71
PABPC1-201ENST00000318607 TRBV7-1A0A0A6YYK4 115 aa10.62□□□□□ -0.71
PABPC1-201ENST00000318607 IGHV4-38-2P0DP08 117 aa10.62□□□□□ -0.71
PABPC1-201ENST00000318607 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
PABPC1-201ENST00000318607 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
PABPC1-201ENST00000318607 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 TRIAP1O43715 76 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 COX6B1P14854 86 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
PABPC1-201ENST00000318607 OVOL1O14753 267 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-201ENST00000318607 UBE2D3P61077 147 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 UBE2D2P62837 147 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE7O76087 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 IFITM1P13164 125 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 NDUFV3P56181 108 aaKnown RBP10.6□□□□□ -0.71
PABPC1-201ENST00000318607 GAGE4Q13068 117 aa10.6□□□□□ -0.71
PABPC1-201ENST00000318607 M0R2P5 195 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 MEIG1Q5JSS6 88 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 TEX15Q9BXT5 2789 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 GCN1Q92616 2671 aaKnown RBP10.59□□□□□ -0.71
PABPC1-201ENST00000318607 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 CFAP46Q8IYW2 2715 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 H3BMM0 161 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
PABPC1-201ENST00000318607 ADAMTSL4-AS1Q5T5F5 129 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms