RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 Q8TAT8 98 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 PTH2Q96A98 100 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 MDFICQ9P1T7 246 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 CUBNO60494 3623 aa9.82□□□□□ -0.84
CPNE1-201ENST00000317677 TMEM213A2RRL7 107 aa9.82□□□□□ -0.84
CPNE1-201ENST00000317677 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
CPNE1-201ENST00000317677 COX8CQ7Z4L0 72 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 KIR2DL4Q99706 377 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 SLC50A1Q9BRV3 221 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 SOCS3O14543 225 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 ERCC8Q13216 396 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 C20orf173Q96LM9 149 aa9.81□□□□□ -0.84
CPNE1-201ENST00000317677 AGRNO00468 2067 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 IGHV7-4-1A0A0J9YVY3 117 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 ELANEP08246 267 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
CPNE1-201ENST00000317677 C18orf65Q6ZTR6 163 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 PRR25Q96S07 402 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
CPNE1-201ENST00000317677 COL6A5A8TX70 2615 aa9.8□□□□□ -0.84
CPNE1-201ENST00000317677 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 LINC01549A6NIU2 74 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-201ENST00000317677 C5orf47Q569G3 176 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 TMEM86BQ8N661 226 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 RASL10AQ92737 203 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 IGHV4OR15-8A0A075B7B6 117 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 A0A087WW49 117 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 LGALS1P09382 135 aaKnown RBP9.79□□□□□ -0.84
CPNE1-201ENST00000317677 ID1P41134 155 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 ANXA2RQ3ZCQ2 193 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 HIST2H2BDQ6DRA6 164 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 Q6ZSV7 163 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 Q8N8P6 123 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 TPPP3Q9BW30 176 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
CPNE1-201ENST00000317677 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 CD7P09564 240 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 ZNF575Q86XF7 245 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 RNF185Q96GF1 192 aa9.78□□□□□ -0.84
CPNE1-201ENST00000317677 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
CPNE1-201ENST00000317677 K7EMT4 169 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 WIPF1O43516 503 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 SH2D1AO60880 128 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 TCL1BO95988 128 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 DEFB1P60022 68 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.84
CPNE1-201ENST00000317677 MRPL53Q96EL3 112 aaKnown RBP9.77□□□□□ -0.84
CPNE1-201ENST00000317677 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.84
CPNE1-201ENST00000317677 RBAKDNA6NC62 111 aa9.77□□□□□ -0.85
CPNE1-201ENST00000317677 C16orf92Q96LL3 132 aa9.77□□□□□ -0.85
CPNE1-201ENST00000317677 CNFNQ9BYD5 112 aa9.77□□□□□ -0.85
CPNE1-201ENST00000317677 IGLV2-18A0A075B6J9 118 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 SMKR1H3BMG3 65 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 TMEM78Q5T7P6 136 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
CPNE1-201ENST00000317677 H7C1H1 209 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 IGKV3-7A0A075B6H7 116 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 DEFB136Q30KP8 78 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 NDUFA11Q86Y39 141 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
CPNE1-201ENST00000317677 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
CPNE1-201ENST00000317677 F8VRH5 84 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 C9orf47Q6ZRZ4 202 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 MDFIQ99750 246 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 HOXD3P31249 432 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-201ENST00000317677 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
CPNE1-201ENST00000317677 Q6ZQT7 251 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 LINC01587Q99440 93 aa9.74□□□□□ -0.85
CPNE1-201ENST00000317677 TMSB15BA0A087X1C1 80 aa9.73□□□□□ -0.85
CPNE1-201ENST00000317677 SLC25A20O43772 301 aa9.73□□□□□ -0.85
CPNE1-201ENST00000317677 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
CPNE1-201ENST00000317677 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
CPNE1-201ENST00000317677 ODF3Q96PU9 254 aa9.73□□□□□ -0.85
CPNE1-201ENST00000317677 F6UB75 175 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 LGALS9O00182 355 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 SLURP1P55000 103 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
CPNE1-201ENST00000317677 LAGE3Q14657 143 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 PRR9Q5T870 116 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
CPNE1-201ENST00000317677 C11orf21Q9P2W6 132 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms