RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 TAGLN2P37802 199 aaKnown RBP11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 UBE2G1P62253 170 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 PEA15Q15121 130 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 CIRBP-AS1Q8TBR5 109 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
EXOSC4-201ENST00000316052 TMEM218A2RU14 115 aa11.37□□□□□ -0.59
EXOSC4-201ENST00000316052 RPL36AP83881 106 aaKnown RBP11.37□□□□□ -0.59
EXOSC4-201ENST00000316052 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
EXOSC4-201ENST00000316052 RPL36ALQ969Q0 106 aaKnown RBP11.37□□□□□ -0.59
EXOSC4-201ENST00000316052 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
EXOSC4-201ENST00000316052 ELOBQ15370 118 aa11.36□□□□□ -0.59
EXOSC4-201ENST00000316052 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
EXOSC4-201ENST00000316052 OR10G8Q8NGN5 311 aa11.36□□□□□ -0.59
EXOSC4-201ENST00000316052 Q0VG73 95 aa11.35□□□□□ -0.59
EXOSC4-201ENST00000316052 C10orf91Q5T1B1 145 aa11.35□□□□□ -0.59
EXOSC4-201ENST00000316052 TRBV6-8A0A0A6YYG3 113 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 IFNA1P01562 189 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 RAB4BP61018 213 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 PRR27Q6MZM9 219 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 TCEAL7Q9BRU2 100 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 CARHSP1Q9Y2V2 147 aaKnown RBP11.34□□□□□ -0.59
EXOSC4-201ENST00000316052 PAGE4O60829 102 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 AKR1C3P42330 323 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 CCL20P78556 96 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 C15orf54Q8N8G6 183 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 MANBALQ9NQG1 85 aa11.33□□□□□ -0.6
EXOSC4-201ENST00000316052 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
EXOSC4-201ENST00000316052 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
EXOSC4-201ENST00000316052 SRSF3P84103 164 aaKnown RBP11.32□□□□□ -0.6
EXOSC4-201ENST00000316052 EIF5A2Q9GZV4 153 aaKnown RBP11.32□□□□□ -0.6
EXOSC4-201ENST00000316052 UBR4Q5T4S7 5183 aa11.32□□□□□ -0.6
EXOSC4-201ENST00000316052 A0A1B0GV50 99 aa11.31□□□□□ -0.6
EXOSC4-201ENST00000316052 BCL2P10415 239 aa11.31□□□□□ -0.6
EXOSC4-201ENST00000316052 ZNF56Q15929 161 aa11.31□□□□□ -0.6
EXOSC4-201ENST00000316052 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
EXOSC4-201ENST00000316052 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
EXOSC4-201ENST00000316052 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
EXOSC4-201ENST00000316052 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
EXOSC4-201ENST00000316052 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
EXOSC4-201ENST00000316052 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
EXOSC4-201ENST00000316052 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
EXOSC4-201ENST00000316052 SCO2A0A1W2PP80 73 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 USP17L23D6RBM5 183 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 SNAI2O43623 268 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 CRPP02741 224 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 CXCL1P09341 107 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
EXOSC4-201ENST00000316052 C9JQL5 133 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 F8W036 122 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 PRSS1P07477 247 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 SSTP61278 116 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 SVBPQ8N300 66 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
EXOSC4-201ENST00000316052 F5H697 171 aa11.27□□□□□ -0.61
EXOSC4-201ENST00000316052 OXTP01178 125 aa11.27□□□□□ -0.61
EXOSC4-201ENST00000316052 OR5AL1P0C617 328 aa11.27□□□□□ -0.61
EXOSC4-201ENST00000316052 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
EXOSC4-201ENST00000316052 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.61
EXOSC4-201ENST00000316052 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 APOC3P02656 99 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 MIAQ16674 131 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 SERTAD4-AS1Q5TG53 156 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
EXOSC4-201ENST00000316052 SNAPINO95295 136 aa11.25□□□□□ -0.61
EXOSC4-201ENST00000316052 RBX1P62877 108 aa11.25□□□□□ -0.61
EXOSC4-201ENST00000316052 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
EXOSC4-201ENST00000316052 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 GAGE6Q13070 117 aa11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
EXOSC4-201ENST00000316052 PANO1I0J062 215 aa11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 PDE6DO43924 150 aa11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 RPL37AP61513 92 aaKnown RBP11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 PKIAP61925 76 aa11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 FAM74A3Q4VXF1 159 aa11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
EXOSC4-201ENST00000316052 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
EXOSC4-201ENST00000316052 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms