RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 LINC00694P0DN24 101 aa12.25□□□□□ -0.45
CCDC8-201ENST00000307522 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
CCDC8-201ENST00000307522 S100A4P26447 101 aaKnown RBP12.25□□□□□ -0.45
CCDC8-201ENST00000307522 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
CCDC8-201ENST00000307522 IGHV4-38-2P0DP08 117 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 TMEM30BQ3MIR4 351 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 LINC01559Q495D7 138 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 DUX5Q96PT3 197 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 JPT2Q9H910 190 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 TRAV12-1A0A0B4J245 112 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 MFAP4P55083 255 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 MUSTN1Q8IVN3 82 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 CLEC2BQ92478 149 aa12.24□□□□□ -0.45
CCDC8-201ENST00000307522 TSHBP01222 138 aa12.23□□□□□ -0.45
CCDC8-201ENST00000307522 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
CCDC8-201ENST00000307522 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
CCDC8-201ENST00000307522 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
CCDC8-201ENST00000307522 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 RS1O15537 224 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
CCDC8-201ENST00000307522 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
CCDC8-201ENST00000307522 FAM236AA0A1B0GUQ0 79 aa12.21□□□□□ -0.45
CCDC8-201ENST00000307522 FAM236BA0A1B0GV22 79 aa12.21□□□□□ -0.45
CCDC8-201ENST00000307522 NACAE9PAV3 2078 aa12.21□□□□□ -0.45
CCDC8-201ENST00000307522 H3BMM0 161 aa12.21□□□□□ -0.46
CCDC8-201ENST00000307522 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.46
CCDC8-201ENST00000307522 UBE2WQ96B02 151 aa12.21□□□□□ -0.46
CCDC8-201ENST00000307522 CTSGP08311 255 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 A0A087WWL8 130 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 ATP6V0E1O15342 81 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 GNRH2O43555 120 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 TRIAP1O43715 76 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 ASIPP42127 132 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 LINC01619G3V211 115 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 J3QQQ9 107 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 SIRPDQ9H106 197 aa12.2□□□□□ -0.46
CCDC8-201ENST00000307522 ZNF256Q9Y2P7 627 aaPredicted RBP12.2□□□□□ -0.46
CCDC8-201ENST00000307522 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 TRAV12-3A0A0B4J271 114 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 F5H697 171 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 AVPP01185 164 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 MUC4Q99102 2169 aa12.19□□□□□ -0.46
CCDC8-201ENST00000307522 ODF3BA8MYP8 253 aa12.18□□□□□ -0.46
CCDC8-201ENST00000307522 C8orf31Q8N9H6 132 aa12.18□□□□□ -0.46
CCDC8-201ENST00000307522 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
CCDC8-201ENST00000307522 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
CCDC8-201ENST00000307522 JMJD1CQ15652 2540 aa12.18□□□□□ -0.46
CCDC8-201ENST00000307522 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
CCDC8-201ENST00000307522 F6UB75 175 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
CCDC8-201ENST00000307522 LINC01587Q99440 93 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 M0R1W7 72 aa12.17□□□□□ -0.46
CCDC8-201ENST00000307522 GCN1Q92616 2671 aaKnown RBP12.17□□□□□ -0.46
CCDC8-201ENST00000307522 A8MZ25 164 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 NPFFO15130 113 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 BLCAPP62952 87 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
CCDC8-201ENST00000307522 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 DAND5Q8N907 189 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 Q8N9W7 124 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 LGALS9O00182 355 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 PMVKQ15126 192 aa12.16□□□□□ -0.46
CCDC8-201ENST00000307522 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
CCDC8-201ENST00000307522 COX8CQ7Z4L0 72 aa12.15□□□□□ -0.46
CCDC8-201ENST00000307522 UBE2E1P51965 193 aa12.15□□□□□ -0.46
CCDC8-201ENST00000307522 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.46
CCDC8-201ENST00000307522 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.47
CCDC8-201ENST00000307522 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.47
CCDC8-201ENST00000307522 H7C423 109 aa12.14□□□□□ -0.47
CCDC8-201ENST00000307522 AMELXQ99217 191 aa12.14□□□□□ -0.47
CCDC8-201ENST00000307522 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
CCDC8-201ENST00000307522 H3BUX3 64 aa12.14□□□□□ -0.47
CCDC8-201ENST00000307522 RNASE4P34096 147 aaKnown RBP12.14□□□□□ -0.47
CCDC8-201ENST00000307522 A0A0U1RRA0 63 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
CCDC8-201ENST00000307522 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 SPXQ9BT56 116 aa12.13□□□□□ -0.47
CCDC8-201ENST00000307522 TRBV12-3P01733 135 aa12.12□□□□□ -0.47
CCDC8-201ENST00000307522 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
CCDC8-201ENST00000307522 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms