RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 C7orf77A4D0Y5 90 aa15.38■□□□□ 0.05
HOXD4-201ENST00000306324 A0A1B0GW15 77 aa15.37■□□□□ 0.05
HOXD4-201ENST00000306324 RASL11AQ6T310 242 aa15.37■□□□□ 0.05
HOXD4-201ENST00000306324 GTSF1LQ9H1H1 148 aa15.37■□□□□ 0.05
HOXD4-201ENST00000306324 HBBP68871 147 aa15.36■□□□□ 0.05
HOXD4-201ENST00000306324 RHEBQ15382 184 aa15.36■□□□□ 0.05
HOXD4-201ENST00000306324 AMN1Q8IY45 258 aa15.36■□□□□ 0.05
HOXD4-201ENST00000306324 RPS10P5Q9NQ39 176 aa15.36■□□□□ 0.05
HOXD4-201ENST00000306324 TNFRSF18Q9Y5U5 241 aa15.36■□□□□ 0.05
HOXD4-201ENST00000306324 IGLV2-18A0A075B6J9 118 aa15.35■□□□□ 0.05
HOXD4-201ENST00000306324 UBE2D3P61077 147 aa15.35■□□□□ 0.05
HOXD4-201ENST00000306324 UBE2D2P62837 147 aa15.35■□□□□ 0.05
HOXD4-201ENST00000306324 GATD1Q8NB37 220 aa15.35■□□□□ 0.05
HOXD4-201ENST00000306324 UPK3BQ9BT76 320 aa15.35■□□□□ 0.05
HOXD4-201ENST00000306324 S100A8P05109 93 aa15.34■□□□□ 0.05
HOXD4-201ENST00000306324 ATP5L2Q7Z4Y8 100 aa15.34■□□□□ 0.05
HOXD4-201ENST00000306324 SVBPQ8N300 66 aa15.34■□□□□ 0.05
HOXD4-201ENST00000306324 IMMP2LQ96T52 175 aa15.34■□□□□ 0.05
HOXD4-201ENST00000306324 A0A1B0GXF2 115 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 TIRAPP58753 221 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 KCNIP4Q6PIL6 250 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 Q9H8V8 135 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 NIT2Q9NQR4 276 aa15.33■□□□□ 0.05
HOXD4-201ENST00000306324 A0A087WWC5 75 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 IGHV3-38A0A0C4DH36 116 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 SNAPINO95295 136 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 RAB4AP20338 218 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 RNF185Q96GF1 192 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 BTF3L4Q96K17 158 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 TMEM242Q9NWH2 141 aa15.33■□□□□ 0.04
HOXD4-201ENST00000306324 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.32■□□□□ 0.04
HOXD4-201ENST00000306324 M0R2N4 97 aa15.31■□□□□ 0.04
HOXD4-201ENST00000306324 OR10J3Q5JRS4 329 aa15.31■□□□□ 0.04
HOXD4-201ENST00000306324 FAM104BQ5XKR9 115 aa15.31■□□□□ 0.04
HOXD4-201ENST00000306324 RPL39LQ96EH5 51 aaKnown RBP15.31■□□□□ 0.04
HOXD4-201ENST00000306324 URGCP-MRPS24S4R325 110 aa15.31■□□□□ 0.04
HOXD4-201ENST00000306324 SIVA1O15304 175 aa15.3■□□□□ 0.04
HOXD4-201ENST00000306324 S100PP25815 95 aa15.3■□□□□ 0.04
HOXD4-201ENST00000306324 LELP1Q5T871 98 aa15.3■□□□□ 0.04
HOXD4-201ENST00000306324 WFDC10BQ8IUB3 73 aa15.3■□□□□ 0.04
HOXD4-201ENST00000306324 TRAV8-6A0A0B4J262 113 aa15.29■□□□□ 0.04
HOXD4-201ENST00000306324 DAZ4Q86SG3 579 aaKnown RBP15.29■□□□□ 0.04
HOXD4-201ENST00000306324 FRZBQ92765 325 aa15.29■□□□□ 0.04
HOXD4-201ENST00000306324 MRAP2Q96G30 205 aa15.29■□□□□ 0.04
HOXD4-201ENST00000306324 DAZ3Q9NR90 486 aaKnown RBP15.29■□□□□ 0.04
HOXD4-201ENST00000306324 GAS8-AS1O95177 125 aa15.28■□□□□ 0.04
HOXD4-201ENST00000306324 SMKR1H3BMG3 65 aa15.27■□□□□ 0.04
HOXD4-201ENST00000306324 NCR2O95944 276 aa15.27■□□□□ 0.04
HOXD4-201ENST00000306324 MRPL51Q4U2R6 128 aaKnown RBP15.27■□□□□ 0.04
HOXD4-201ENST00000306324 TRAV9-1A0A075B6T8 112 aa15.26■□□□□ 0.03
HOXD4-201ENST00000306324 NBDYA0A0U1RRE5 68 aa15.26■□□□□ 0.03
HOXD4-201ENST00000306324 RPS10P46783 165 aaKnown RBP15.25■□□□□ 0.03
HOXD4-201ENST00000306324 CKS2P33552 79 aa15.24■□□□□ 0.03
HOXD4-201ENST00000306324 DEFB104AQ8WTQ1 72 aa15.24■□□□□ 0.03
HOXD4-201ENST00000306324 TRBV6-8A0A0A6YYG3 113 aa15.23■□□□□ 0.03
HOXD4-201ENST00000306324 ST20Q9HBF5 79 aa15.23■□□□□ 0.03
HOXD4-201ENST00000306324 SDHAF1A6NFY7 115 aa15.22■□□□□ 0.03
HOXD4-201ENST00000306324 TMEM97Q5BJF2 176 aa15.22■□□□□ 0.03
HOXD4-201ENST00000306324 TTC32Q5I0X7 151 aa15.22■□□□□ 0.03
HOXD4-201ENST00000306324 TRBV6-5A0A0K0K1A5 114 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 D6R8Y8 96 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 DNAH10OSP0CZ25 163 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 ATRAIDQ6UW56 229 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 Q6ZR54 194 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 NTM-AS1Q6ZSK4 140 aa15.21■□□□□ 0.03
HOXD4-201ENST00000306324 PPP1R17O96001 155 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 NRACQ8N912 160 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 DNAH2Q9P225 4427 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 IGHV3-30P01768 117 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 IGHV3-33P01772 117 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 IGHV3-30-3P0DP02 117 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 IGHV3-30-5P0DP03 117 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 COTL1Q14019 142 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 KRTAP1-5Q9BYS1 174 aa15.2■□□□□ 0.02
HOXD4-201ENST00000306324 TRBV25-1A0A075B6N4 114 aa15.19■□□□□ 0.02
HOXD4-201ENST00000306324 LINC01556Q5JQF7 62 aa15.19■□□□□ 0.02
HOXD4-201ENST00000306324 TMEM136Q6ZRR5 245 aa15.19■□□□□ 0.02
HOXD4-201ENST00000306324 TMEM70Q9BUB7 260 aa15.19■□□□□ 0.02
HOXD4-201ENST00000306324 TRAV9-2A0A087WT02 112 aa15.18■□□□□ 0.02
HOXD4-201ENST00000306324 IGHV1-24A0A0C4DH33 117 aa15.18■□□□□ 0.02
HOXD4-201ENST00000306324 PPBPP02775 128 aa15.18■□□□□ 0.02
HOXD4-201ENST00000306324 PMCHP20382 165 aa15.18■□□□□ 0.02
HOXD4-201ENST00000306324 CHCHD5Q9BSY4 110 aa15.18■□□□□ 0.02
HOXD4-201ENST00000306324 ORMDL3Q8N138 153 aa15.17■□□□□ 0.02
HOXD4-201ENST00000306324 Q8N3U1 123 aa15.17■□□□□ 0.02
HOXD4-201ENST00000306324 TGIF2-C20orf24A0A0A6YYL0 155 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 TMEM262E9PQX1 116 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 I3L3M4 83 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 TNFRSF6BO95407 300 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 SUMO2P61956 95 aaKnown RBP15.16■□□□□ 0.02
HOXD4-201ENST00000306324 ELOBQ15370 118 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 IQCJQ1A5X6 159 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 NIT1Q86X76 327 aa15.16■□□□□ 0.02
HOXD4-201ENST00000306324 NPYP01303 97 aa15.15■□□□□ 0.02
HOXD4-201ENST00000306324 POLR2KP53803 58 aaKnown RBP15.15■□□□□ 0.02
HOXD4-201ENST00000306324 PRELID3AQ96N28 172 aa15.15■□□□□ 0.02
HOXD4-201ENST00000306324 DNAH10Q8IVF4 4471 aa15.15■□□□□ 0.02
HOXD4-201ENST00000306324 TRBV24-1A0A075B6N3 115 aa15.14■□□□□ 0.01
HOXD4-201ENST00000306324 A0A087WX48 190 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms