RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ORMDL2Q53FV1 153 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 SCGB1C2P0DMR2 95 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
LONRF3-201ENST00000304778 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 RASL10AQ92737 203 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
LONRF3-201ENST00000304778 S100A4P26447 101 aaKnown RBP12.11□□□□□ -0.47
LONRF3-201ENST00000304778 ASIPP42127 132 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 IGHV4-31P0DP07 118 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 IFITM1P13164 125 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 CFHR3Q02985 330 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
LONRF3-201ENST00000304778 TOMM6Q96B49 74 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
LONRF3-201ENST00000304778 FAM19A4Q96LR4 140 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
LONRF3-201ENST00000304778 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 SCGB3A1Q96QR1 104 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 BEX4Q9NWD9 120 aaPredicted RBP12.09□□□□□ -0.47
LONRF3-201ENST00000304778 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 SLC25A20O43772 301 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
LONRF3-201ENST00000304778 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
LONRF3-201ENST00000304778 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 TLN2Q9Y4G6 2542 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 C9JAW5 83 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 RAX2Q96IS3 184 aa12.08□□□□□ -0.48
LONRF3-201ENST00000304778 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 CFC1P0CG37 223 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 RNASE4P34096 147 aaKnown RBP12.07□□□□□ -0.48
LONRF3-201ENST00000304778 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
LONRF3-201ENST00000304778 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
LONRF3-201ENST00000304778 F6UB75 175 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 MGPP08493 103 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 J3QKU1 62 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 FSHBP01225 129 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
LONRF3-201ENST00000304778 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
LONRF3-201ENST00000304778 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 Q96MF0 132 aa12.06□□□□□ -0.48
LONRF3-201ENST00000304778 CR1P17927 2039 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 GNRH2O43555 120 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 PSMB8P28062 276 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
LONRF3-201ENST00000304778 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 BAALCQ8WXS3 180 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 NXPH4O95158 308 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 PPP1R17O96001 155 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 Q6YL49 198 aa12.04□□□□□ -0.48
LONRF3-201ENST00000304778 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
LONRF3-201ENST00000304778 A0A0J9YY99 117 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 MEIG1Q5JSS6 88 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 Q8N1Y9 231 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
LONRF3-201ENST00000304778 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
LONRF3-201ENST00000304778 APCP25054 2843 aa12.02□□□□□ -0.48
LONRF3-201ENST00000304778 EDN2P20800 178 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 C3orf56Q8N813 242 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
LONRF3-201ENST00000304778 MUC4Q99102 2169 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 SORL1Q92673 2214 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 KLLNB2CW77 178 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 H7C2G1 150 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 Q6Q795 121 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
LONRF3-201ENST00000304778 LINC00315P59091 139 aa12□□□□□ -0.49
LONRF3-201ENST00000304778 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
LONRF3-201ENST00000304778 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 A0A087WW49 117 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 DUSP14O95147 198 aaKnown RBP11.99□□□□□ -0.49
LONRF3-201ENST00000304778 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
LONRF3-201ENST00000304778 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 ITPR2Q14571 2701 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
LONRF3-201ENST00000304778 K7EMT4 169 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms