RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 NDUFA11Q86Y39 141 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 C14orf177Q52M58 125 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 C16orf74Q96GX8 76 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 VPREB3Q9UKI3 123 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 COX7CP15954 63 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 TDRG1Q3Y452 100 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 MUC7Q8TAX7 377 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 DAZ2Q13117 558 aaKnown RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 DAZ4Q86SG3 579 aaKnown RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 DAZ3Q9NR90 486 aaKnown RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 MALRD1Q5VYJ5 2156 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 GTSF1Q8WW33 167 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 BLCAPP62952 87 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 SPRNQ5BIV9 151 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 IGHV4OR15-8A0A075B7B6 117 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 A0A087WW49 117 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 Q6JHZ5 121 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 F8W735 103 aaPredicted RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 ELANEP08246 267 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 HIGD2BQ4VC39 106 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 RITA1Q96K30 269 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 DYSFO75923 2080 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 TIMM17BO60830 172 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 PRRC2AP48634 2157 aaKnown RBP4.32□□□□□ -1.72
CPSF2-201ENST00000298875 H0Y9J4 135 aa4.32□□□□□ -1.72
CPSF2-201ENST00000298875 CXCL6P80162 114 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 NPBQ8NG41 125 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 H3BUA1 57 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 C9orf66Q5T8R8 295 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 DEFB112Q30KQ8 113 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
CPSF2-201ENST00000298875 FXYD2P54710 66 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 ESM1Q9NQ30 184 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 AGRNO00468 2067 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 Q8NFD4 153 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 USP17L23D6RBM5 183 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 DOPEY1Q5JWR5 2465 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 IGKV4-1P06312 121 aa4.31□□□□□ -1.72
CPSF2-201ENST00000298875 HIVEP3Q5T1R4 2406 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 LECT2O14960 151 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PRR20EP86478 221 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PRR20CP86479 221 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PRR20DP86480 221 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PRR20BP86481 221 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PRR20AP86496 221 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 ODF1Q14990 250 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 WI2-2373I1.2A0A1W2PRP0 233 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 NUPR1O60356 82 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 WFDC2Q14508 124 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 OTOGLQ3ZCN5 2332 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 GP9P14770 177 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 NRACQ8N912 160 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 NDUFA1O15239 70 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 MIAQ16674 131 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 PROK2Q9HC23 129 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 DENND4CQ5VZ89 1909 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 A6NED7 52 aa4.3□□□□□ -1.72
CPSF2-201ENST00000298875 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
CPSF2-201ENST00000298875 LOXL1Q08397 574 aaPredicted RBP4.29□□□□□ -1.72
CPSF2-201ENST00000298875 NCOA6Q14686 2063 aaPredicted RBP4.29□□□□□ -1.72
CPSF2-201ENST00000298875 IGLV1-44P01699 117 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 SONP18583 2426 aaKnown RBP4.29□□□□□ -1.72
CPSF2-201ENST00000298875 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
CPSF2-201ENST00000298875 H7C423 109 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 SPART-AS1P0CW21 52 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 DIRC1Q969H9 104 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 AJUBAQ96IF1 538 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
CPSF2-201ENST00000298875 IGKV2D-26A0A0A0MRZ7 120 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 UBE2D2P62837 147 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 I3L2K1 104 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 CTSZQ9UBR2 303 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 IGHV4-38-2P0DP08 117 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 TEX49A0A1B0GTD5 131 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 TCL1BO95988 128 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 NFE4Q86UQ8 179 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 MSRB1Q9NZV6 116 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 NUP210LQ5VU65 1888 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 LY6G6EA0A0G2JKS1 128 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 FAM215AQ9Y5M1 114 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 U3KQA8 63 aa4.28□□□□□ -1.72
CPSF2-201ENST00000298875 PRAC2D3DTV9 90 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms