RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C18orf65Q6ZTR6 163 aa18.03■□□□□ 0.48
SPTSSA-201ENST00000298130 KNCNA6PVL3 124 aa18.03■□□□□ 0.48
SPTSSA-201ENST00000298130 LGALS9O00182 355 aa18.03■□□□□ 0.48
SPTSSA-201ENST00000298130 HERVK_113P61574 105 aa18.03■□□□□ 0.48
SPTSSA-201ENST00000298130 IGHV1OR15-1A0A075B7D0 117 aa18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 TRBV27A0A0K0K1C4 114 aa18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 Q9UF83 564 aa18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 LINC01619G3V211 115 aa18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 K7EQG2 157 aa18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 RNASE13Q5GAN3 156 aaKnown RBP18.02■□□□□ 0.48
SPTSSA-201ENST00000298130 RBMY1A1P0DJD3 496 aaKnown RBP18.02■□□□□ 0.47
SPTSSA-201ENST00000298130 RBMY1CP0DJD4 496 aa18.02■□□□□ 0.47
SPTSSA-201ENST00000298130 RBMY1FQ15415 496 aaKnown RBP18.02■□□□□ 0.47
SPTSSA-201ENST00000298130 UBE2D1P51668 147 aa18.01■□□□□ 0.47
SPTSSA-201ENST00000298130 DUX3Q96PT4 197 aa18.01■□□□□ 0.47
SPTSSA-201ENST00000298130 GAGE12HA6NDE8 117 aa18.01■□□□□ 0.47
SPTSSA-201ENST00000298130 SMCPP49901 116 aaPredicted RBP18.01■□□□□ 0.47
SPTSSA-201ENST00000298130 CEMP1Q6PRD7 247 aaPredicted RBP18.01■□□□□ 0.47
SPTSSA-201ENST00000298130 TMEM141Q96I45 108 aa18■□□□□ 0.47
SPTSSA-201ENST00000298130 TIMM17AQ99595 171 aa18■□□□□ 0.47
SPTSSA-201ENST00000298130 ADARB2-AS1A8MUL3 147 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 SAMD13Q5VXD3 122 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 TMEM238LA0A1B0GVL6 79 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 A6NJY4 79 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 H7C2G1 150 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 J3QQQ9 107 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 HOXD3P31249 432 aaPredicted RBP17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 NDUFA11Q86Y39 141 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 SYT8Q8NBV8 401 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 BEX4Q9NWD9 120 aaPredicted RBP17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 TEX15Q9BXT5 2789 aa17.99■□□□□ 0.47
SPTSSA-201ENST00000298130 A0A0J9YXV3 536 aa17.98■□□□□ 0.47
SPTSSA-201ENST00000298130 SONP18583 2426 aaKnown RBP17.98■□□□□ 0.47
SPTSSA-201ENST00000298130 CFC1BP0CG36 223 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 CFC1P0CG37 223 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 NACAE9PAV3 2078 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 IGHV3-30P01768 117 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 IGHV3-30-5P0DP03 117 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 LGALS3P17931 250 aaKnown RBP17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 RPL32P62910 135 aaKnown RBP17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 AMELXQ99217 191 aa17.97■□□□□ 0.47
SPTSSA-201ENST00000298130 RAX2Q96IS3 184 aa17.96■□□□□ 0.47
SPTSSA-201ENST00000298130 ZNF462Q96JM2 2506 aa17.96■□□□□ 0.47
SPTSSA-201ENST00000298130 SLURP1P55000 103 aa17.96■□□□□ 0.46
SPTSSA-201ENST00000298130 DLX4Q92988 240 aaPredicted RBP17.96■□□□□ 0.46
SPTSSA-201ENST00000298130 SETD2Q9BYW2 2564 aaPredicted RBP17.95■□□□□ 0.46
SPTSSA-201ENST00000298130 TRBV6-5A0A0K0K1A5 114 aa17.95■□□□□ 0.46
SPTSSA-201ENST00000298130 PAPPA-AS1Q5QFB9 102 aa17.95■□□□□ 0.46
SPTSSA-201ENST00000298130 SIGMAR1Q99720 223 aa17.95■□□□□ 0.46
SPTSSA-201ENST00000298130 NAV2Q8IVL1 2488 aa17.95■□□□□ 0.46
SPTSSA-201ENST00000298130 TRAV2A0A0B4J234 112 aa17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 TCTEX1D4Q5JR98 221 aa17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 NFE4Q86UQ8 179 aa17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 WNK1Q9H4A3 2382 aa17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 TRPT1Q86TN4 253 aaKnown RBP17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 SLC25A29Q8N8R3 303 aa17.94■□□□□ 0.46
SPTSSA-201ENST00000298130 TCL1BO95988 128 aa17.93■□□□□ 0.46
SPTSSA-201ENST00000298130 DEFB131AP59861 70 aa17.93■□□□□ 0.46
SPTSSA-201ENST00000298130 CFAP126Q5VTH2 177 aa17.93■□□□□ 0.46
SPTSSA-201ENST00000298130 C20orf203Q8NBC4 194 aa17.93■□□□□ 0.46
SPTSSA-201ENST00000298130 SPXQ9BT56 116 aa17.93■□□□□ 0.46
SPTSSA-201ENST00000298130 EPG5Q9HCE0 2579 aa17.92■□□□□ 0.46
SPTSSA-201ENST00000298130 J3QR89 54 aa17.92■□□□□ 0.46
SPTSSA-201ENST00000298130 I3L3M4 83 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 SCGB1C2P0DMR2 95 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 ZNF22P17026 224 aaPredicted RBP17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 ZNF469Q96JG9 3925 aaPredicted RBP17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 IGLV4-3A0A075B6K6 122 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 A4D1N5 150 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 EIF4EBP3O60516 100 aaPredicted RBP17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 LINC01356Q8N9X3 169 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 VCX2Q9H322 139 aa17.91■□□□□ 0.46
SPTSSA-201ENST00000298130 TMEM223A0PJW6 202 aa17.9■□□□□ 0.46
SPTSSA-201ENST00000298130 NSUN5P1Q3KNT7 163 aa17.9■□□□□ 0.46
SPTSSA-201ENST00000298130 C2CD3Q4AC94 2353 aa17.9■□□□□ 0.46
SPTSSA-201ENST00000298130 TRAV8-3A0A0A6YYJ7 113 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 A8MZ25 164 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 PRB1P04280 392 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 UBE2D3P61077 147 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 UBE2D2P62837 147 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 Q6ZSN1 163 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 KHDC1LQ5JSQ8 128 aa17.89■□□□□ 0.45
SPTSSA-201ENST00000298130 IGHV3-38A0A0C4DH36 116 aa17.88■□□□□ 0.45
SPTSSA-201ENST00000298130 RHODO00212 210 aa17.88■□□□□ 0.45
SPTSSA-201ENST00000298130 FOXI1Q12951 378 aa17.88■□□□□ 0.45
SPTSSA-201ENST00000298130 CHD6Q8TD26 2715 aa17.88■□□□□ 0.45
SPTSSA-201ENST00000298130 RBMY1BA6NDE4 496 aaKnown RBP17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 RBMY1EA6NEQ0 496 aaKnown RBP17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 RBMY1DP0C7P1 496 aaKnown RBP17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 ODF3Q96PU9 254 aa17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 MUSTN1Q8IVN3 82 aa17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 ZNF702PQ9H963 129 aa17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 PRRC2AP48634 2157 aaKnown RBP17.87■□□□□ 0.45
SPTSSA-201ENST00000298130 RHOHQ15669 191 aa17.86■□□□□ 0.45
SPTSSA-201ENST00000298130 C10orf126Q8N4M7 172 aa17.86■□□□□ 0.45
SPTSSA-201ENST00000298130 CD28P10747 220 aa17.86■□□□□ 0.45
SPTSSA-201ENST00000298130 NPC2P61916 151 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 C1QTNF4Q9BXJ3 329 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 VPREB3Q9UKI3 123 aa17.85■□□□□ 0.45
SPTSSA-201ENST00000298130 PRO1854Q9UHT4 67 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms