RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
T-201ENST00000296946 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
T-201ENST00000296946 SLC25A20O43772 301 aa13.59□□□□□ -0.23
T-201ENST00000296946 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
T-201ENST00000296946 RPL32P62910 135 aaKnown RBP13.59□□□□□ -0.23
T-201ENST00000296946 U3KQE9 123 aa13.59□□□□□ -0.23
T-201ENST00000296946 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
T-201ENST00000296946 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
T-201ENST00000296946 J3QLI3 93 aa13.59□□□□□ -0.23
T-201ENST00000296946 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
T-201ENST00000296946 NF1P21359 2839 aa13.59□□□□□ -0.23
T-201ENST00000296946 TMEM219Q86XT9 240 aa13.58□□□□□ -0.24
T-201ENST00000296946 OR10J6PQ8NGY7 276 aa13.58□□□□□ -0.24
T-201ENST00000296946 SRD5A1P18405 259 aa13.58□□□□□ -0.24
T-201ENST00000296946 GPHB5Q86YW7 130 aa13.58□□□□□ -0.24
T-201ENST00000296946 KIR2DL4Q99706 377 aa13.58□□□□□ -0.24
T-201ENST00000296946 CITED1Q99966 193 aa13.58□□□□□ -0.24
T-201ENST00000296946 TP53TG1Q9Y2A0 90 aa13.58□□□□□ -0.24
T-201ENST00000296946 IGIPA6NJ69 53 aa13.57□□□□□ -0.24
T-201ENST00000296946 FSHBP01225 129 aa13.57□□□□□ -0.24
T-201ENST00000296946 J3KRW8 73 aa13.56□□□□□ -0.24
T-201ENST00000296946 OVOL1O14753 267 aa13.56□□□□□ -0.24
T-201ENST00000296946 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
T-201ENST00000296946 TMEM170BQ5T4T1 132 aa13.56□□□□□ -0.24
T-201ENST00000296946 ZFAND2AQ8N6M9 145 aa13.56□□□□□ -0.24
T-201ENST00000296946 POM121L12Q8N7R1 296 aa13.56□□□□□ -0.24
T-201ENST00000296946 TSHBP01222 138 aa13.56□□□□□ -0.24
T-201ENST00000296946 ARL3P36405 182 aa13.56□□□□□ -0.24
T-201ENST00000296946 Q6ZS46 218 aa13.56□□□□□ -0.24
T-201ENST00000296946 TIMM17AQ99595 171 aa13.56□□□□□ -0.24
T-201ENST00000296946 RHODO00212 210 aa13.55□□□□□ -0.24
T-201ENST00000296946 ATP6V0E1O15342 81 aa13.55□□□□□ -0.24
T-201ENST00000296946 SNCGO76070 127 aa13.55□□□□□ -0.24
T-201ENST00000296946 LGALS3P17931 250 aaKnown RBP13.55□□□□□ -0.24
T-201ENST00000296946 GAGE2BQ13066 116 aa13.55□□□□□ -0.24
T-201ENST00000296946 GAGE2EQ4V326 116 aa13.55□□□□□ -0.24
T-201ENST00000296946 SHISA2Q6UWI4 295 aa13.55□□□□□ -0.24
T-201ENST00000296946 GAGE2DQ9UEU5 116 aa13.55□□□□□ -0.24
T-201ENST00000296946 IGHV4OR15-8A0A075B7B6 117 aa13.55□□□□□ -0.24
T-201ENST00000296946 A0A087WW49 117 aa13.55□□□□□ -0.24
T-201ENST00000296946 C9JAW5 83 aa13.55□□□□□ -0.24
T-201ENST00000296946 LY6EQ16553 131 aa13.55□□□□□ -0.24
T-201ENST00000296946 ANXA2RQ3ZCQ2 193 aa13.55□□□□□ -0.24
T-201ENST00000296946 J3QQQ9 107 aa13.54□□□□□ -0.24
T-201ENST00000296946 IGF1P05019 195 aa13.54□□□□□ -0.24
T-201ENST00000296946 EMP1P54849 157 aa13.54□□□□□ -0.24
T-201ENST00000296946 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
T-201ENST00000296946 H3BUX3 64 aa13.54□□□□□ -0.24
T-201ENST00000296946 VCYO14598 125 aa13.54□□□□□ -0.24
T-201ENST00000296946 SPRY2O43597 315 aa13.54□□□□□ -0.24
T-201ENST00000296946 P0DMU3 169 aa13.53□□□□□ -0.24
T-201ENST00000296946 FAM231AP0DMU4 169 aa13.53□□□□□ -0.24
T-201ENST00000296946 FAM231CP0DMU5 169 aa13.53□□□□□ -0.24
T-201ENST00000296946 CYSRT1A8MQ03 144 aa13.53□□□□□ -0.24
T-201ENST00000296946 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
T-201ENST00000296946 C20orf173Q96LM9 149 aa13.53□□□□□ -0.24
T-201ENST00000296946 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.24
T-201ENST00000296946 ZNF876PQ49A33 203 aa13.52□□□□□ -0.24
T-201ENST00000296946 A0A0B4J2C4 111 aa13.52□□□□□ -0.25
T-201ENST00000296946 IGHV4-59P01825 116 aa13.52□□□□□ -0.25
T-201ENST00000296946 POLR2KP53803 58 aaKnown RBP13.52□□□□□ -0.25
T-201ENST00000296946 HIVEP2P31629 2446 aa13.52□□□□□ -0.25
T-201ENST00000296946 A4D1N5 150 aa13.51□□□□□ -0.25
T-201ENST00000296946 IGHV3-33P01772 117 aa13.51□□□□□ -0.25
T-201ENST00000296946 B5MCH6 92 aa13.51□□□□□ -0.25
T-201ENST00000296946 RNASE3P12724 160 aaKnown RBP13.51□□□□□ -0.25
T-201ENST00000296946 ATXN8Q156A1 80 aa13.51□□□□□ -0.25
T-201ENST00000296946 TTC32Q5I0X7 151 aa13.51□□□□□ -0.25
T-201ENST00000296946 AMELXQ99217 191 aa13.51□□□□□ -0.25
T-201ENST00000296946 YAE1D1Q9NRH1 226 aa13.51□□□□□ -0.25
T-201ENST00000296946 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
T-201ENST00000296946 NXPH4O95158 308 aa13.5□□□□□ -0.25
T-201ENST00000296946 RNASE4P34096 147 aaKnown RBP13.5□□□□□ -0.25
T-201ENST00000296946 NDUFV3P56181 108 aaKnown RBP13.5□□□□□ -0.25
T-201ENST00000296946 Q6Q795 121 aa13.5□□□□□ -0.25
T-201ENST00000296946 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
T-201ENST00000296946 G3V318 75 aa13.5□□□□□ -0.25
T-201ENST00000296946 GNRH2O43555 120 aa13.5□□□□□ -0.25
T-201ENST00000296946 ZNRF2Q8NHG8 242 aa13.5□□□□□ -0.25
T-201ENST00000296946 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
T-201ENST00000296946 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
T-201ENST00000296946 SPANXA1Q9NS26 97 aa13.49□□□□□ -0.25
T-201ENST00000296946 KIF25-AS1Q9Y6Z4 181 aa13.49□□□□□ -0.25
T-201ENST00000296946 LEPROTO15243 131 aa13.49□□□□□ -0.25
T-201ENST00000296946 NHLRC4P0CG21 123 aaPredicted RBP13.49□□□□□ -0.25
T-201ENST00000296946 IFITM1P13164 125 aa13.49□□□□□ -0.25
T-201ENST00000296946 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
T-201ENST00000296946 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
T-201ENST00000296946 LINC01600Q96MT4 127 aa13.49□□□□□ -0.25
T-201ENST00000296946 NSD1Q96L73 2696 aaPredicted RBP13.48□□□□□ -0.25
T-201ENST00000296946 GAGE12JA6NER3 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 GAGE7O76087 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 GAGE12FP0CL80 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 GAGE12GP0CL81 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 GAGE4Q13068 117 aa13.48□□□□□ -0.25
T-201ENST00000296946 Q8N1Y9 231 aa13.48□□□□□ -0.25
T-201ENST00000296946 C5orf56Q8N8D9 126 aa13.48□□□□□ -0.25
T-201ENST00000296946 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
T-201ENST00000296946 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms