RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
PPP1CB-201ENST00000296122 NMUP48645 174 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 TCTAP57738 103 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 KIF25-AS1Q9Y6Z4 181 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 M0QY20 66 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
PPP1CB-201ENST00000296122 PRSS47A8MTI9 375 aa9.59□□□□□ -0.88
PPP1CB-201ENST00000296122 M0R143 59 aa9.59□□□□□ -0.88
PPP1CB-201ENST00000296122 IGKCP01834 107 aa9.59□□□□□ -0.88
PPP1CB-201ENST00000296122 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
PPP1CB-201ENST00000296122 ERASQ7Z444 233 aa9.58□□□□□ -0.88
PPP1CB-201ENST00000296122 DEFB130BP0DP73 79 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 DEFB130AP0DP74 79 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 RHOHQ15669 191 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 SMAGPQ0VAQ4 97 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 Q6ZTI0 123 aa9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
PPP1CB-201ENST00000296122 HERVK_113P61574 105 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 MUC4Q99102 2169 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 A0A096LNJ9 63 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 LINC00315P59091 139 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 PLNP26678 52 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 POLR2KP53803 58 aaKnown RBP9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 Q8N976 141 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
PPP1CB-201ENST00000296122 KRTAP24-1Q3LI83 254 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 PTH2Q96A98 100 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 DKK2Q9UBU2 259 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 TRBV27A0A0K0K1C4 114 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 RS1O15537 224 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 CTAG1AP78358 180 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 VCX2Q9H322 139 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 TRAV4A0A0B4J268 109 aa9.55□□□□□ -0.88
PPP1CB-201ENST00000296122 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 UBE2L6O14933 153 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 P0DMU3 169 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 FAM231AP0DMU4 169 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 FAM231CP0DMU5 169 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 RIPPLY3P57055 190 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 POM121L12Q8N7R1 296 aa9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 MRPL35Q9NZE8 188 aaKnown RBP9.54□□□□□ -0.88
PPP1CB-201ENST00000296122 CIDEAO60543 219 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 ZC2HC1BQ5TFG8 222 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 AMMECR1LQ6DCA0 310 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 STPG4Q8N801 248 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 C19orf73Q9NVV2 129 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 A0A087WX48 190 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 GAGE12JA6NER3 117 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 F8VRH5 84 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 GAGE1Q13065 139 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 GAGE4Q13068 117 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 GAGE5Q13069 117 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 GAGE13Q4V321 117 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 K7EQD1 137 aa9.53□□□□□ -0.88
PPP1CB-201ENST00000296122 LINC01546A6NGU7 62 aa9.52□□□□□ -0.88
PPP1CB-201ENST00000296122 KIR2DL5BQ8NHK3 375 aa9.52□□□□□ -0.88
PPP1CB-201ENST00000296122 ZNF479Q96JC4 524 aa9.52□□□□□ -0.88
PPP1CB-201ENST00000296122 PMVKQ15126 192 aa9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 ODF1Q14990 250 aa9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 TMEM170BQ5T4T1 132 aa9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
PPP1CB-201ENST00000296122 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
PPP1CB-201ENST00000296122 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
PPP1CB-201ENST00000296122 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
PPP1CB-201ENST00000296122 TIMM17AQ99595 171 aa9.51□□□□□ -0.89
PPP1CB-201ENST00000296122 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
PPP1CB-201ENST00000296122 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 TRAV8-6A0A0B4J262 113 aa9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 LBHQ53QV2 105 aaPredicted RBP9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
PPP1CB-201ENST00000296122 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms