RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 RIPPLY3P57055 190 aa14.7□□□□□ -0.06
SCUBE1-201ENST00000290460 Q5PR19 223 aa14.7□□□□□ -0.06
SCUBE1-201ENST00000290460 OPRPNQ99935 248 aaPredicted RBP14.7□□□□□ -0.06
SCUBE1-201ENST00000290460 WNK1Q9H4A3 2382 aa14.7□□□□□ -0.06
SCUBE1-201ENST00000290460 NF1P21359 2839 aa14.7□□□□□ -0.06
SCUBE1-201ENST00000290460 DEFB131AP59861 70 aa14.69□□□□□ -0.06
SCUBE1-201ENST00000290460 RNF152Q8N8N0 203 aa14.69□□□□□ -0.06
SCUBE1-201ENST00000290460 SCGB1D4Q6XE38 83 aa14.69□□□□□ -0.06
SCUBE1-201ENST00000290460 TIMM17AQ99595 171 aa14.69□□□□□ -0.06
SCUBE1-201ENST00000290460 TMEM141Q96I45 108 aa14.68□□□□□ -0.06
SCUBE1-201ENST00000290460 ZNF479Q96JC4 524 aa14.68□□□□□ -0.06
SCUBE1-201ENST00000290460 ZNRF2Q8NHG8 242 aa14.68□□□□□ -0.06
SCUBE1-201ENST00000290460 NACAE9PAV3 2078 aa14.68□□□□□ -0.06
SCUBE1-201ENST00000290460 ITPR3Q14573 2671 aa14.68□□□□□ -0.06
SCUBE1-201ENST00000290460 IGHV3-73A0A0B4J1V6 119 aa14.67□□□□□ -0.06
SCUBE1-201ENST00000290460 LINC01619G3V211 115 aa14.67□□□□□ -0.06
SCUBE1-201ENST00000290460 KHDC1LQ5JSQ8 128 aa14.67□□□□□ -0.06
SCUBE1-201ENST00000290460 TRPT1Q86TN4 253 aaKnown RBP14.67□□□□□ -0.06
SCUBE1-201ENST00000290460 P0DMU3 169 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 FAM231AP0DMU4 169 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 FAM231CP0DMU5 169 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 TMEM170BQ5T4T1 132 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 ZNF843Q8N446 348 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 TRGV11A0A075B6L2 103 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 RBMY1BA6NDE4 496 aaKnown RBP14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 RBMY1EA6NEQ0 496 aaKnown RBP14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 RBMY1DP0C7P1 496 aaKnown RBP14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 TSPEAR-AS2P59090 65 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 DEFB113Q30KQ7 82 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 TMEM61Q8N0U2 210 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 Q96MF0 132 aa14.66□□□□□ -0.06
SCUBE1-201ENST00000290460 LINC01549A6NIU2 74 aa14.65□□□□□ -0.06
SCUBE1-201ENST00000290460 PROK1P58294 105 aa14.64□□□□□ -0.07
SCUBE1-201ENST00000290460 NSUN5P1Q3KNT7 163 aa14.64□□□□□ -0.07
SCUBE1-201ENST00000290460 PAPPA-AS1Q5QFB9 102 aa14.64□□□□□ -0.07
SCUBE1-201ENST00000290460 CCDC168Q8NDH2 2452 aa14.64□□□□□ -0.07
SCUBE1-201ENST00000290460 HERVK_113P61574 105 aa14.63□□□□□ -0.07
SCUBE1-201ENST00000290460 A0A1B0GWB2 263 aa14.63□□□□□ -0.07
SCUBE1-201ENST00000290460 H3BMM0 161 aa14.63□□□□□ -0.07
SCUBE1-201ENST00000290460 SRSF9Q13242 221 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCUBE1-201ENST00000290460 SETD2Q9BYW2 2564 aaPredicted RBP14.63□□□□□ -0.07
SCUBE1-201ENST00000290460 RRN3P1Q2M238 152 aa14.62□□□□□ -0.07
SCUBE1-201ENST00000290460 I3L3M4 83 aa14.62□□□□□ -0.07
SCUBE1-201ENST00000290460 RHOHQ15669 191 aa14.62□□□□□ -0.07
SCUBE1-201ENST00000290460 H3BMG7 143 aa14.61□□□□□ -0.07
SCUBE1-201ENST00000290460 Q8N2B8 174 aa14.61□□□□□ -0.07
SCUBE1-201ENST00000290460 C20orf203Q8NBC4 194 aa14.61□□□□□ -0.07
SCUBE1-201ENST00000290460 DLX4Q92988 240 aaPredicted RBP14.61□□□□□ -0.07
SCUBE1-201ENST00000290460 Q9UF83 564 aa14.61□□□□□ -0.07
SCUBE1-201ENST00000290460 FLNAP21333 2647 aaKnown RBP14.6□□□□□ -0.07
SCUBE1-201ENST00000290460 A0A0J9YY99 117 aa14.6□□□□□ -0.07
SCUBE1-201ENST00000290460 G3V4G9 280 aa14.6□□□□□ -0.07
SCUBE1-201ENST00000290460 RPL24P83731 157 aaKnown RBP14.59□□□□□ -0.07
SCUBE1-201ENST00000290460 MTURNQ8N3F0 131 aa14.59□□□□□ -0.07
SCUBE1-201ENST00000290460 C4orf3Q8WVX3 66 aa14.59□□□□□ -0.07
SCUBE1-201ENST00000290460 PGPEP1Q9NXJ5 209 aa14.59□□□□□ -0.07
SCUBE1-201ENST00000290460 PEMTQ9UBM1 199 aa14.58□□□□□ -0.08
SCUBE1-201ENST00000290460 KRTAP1-3Q8IUG1 177 aa14.58□□□□□ -0.08
SCUBE1-201ENST00000290460 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
SCUBE1-201ENST00000290460 MAP6D1Q9H9H5 199 aa14.58□□□□□ -0.08
SCUBE1-201ENST00000290460 IGHV3-64A0A075B6Q5 118 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 TEX48A0A1B0GUV7 120 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 DYNLRB2Q8TF09 96 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 NOTCH3Q9UM47 2321 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 A8MTW9 85 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 J3QQQ9 107 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 WFDC2Q14508 124 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 SFTA2Q6UW10 78 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 AMELXQ99217 191 aa14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 MRPL16Q9NX20 251 aaKnown RBP14.57□□□□□ -0.08
SCUBE1-201ENST00000290460 IGLV4-3A0A075B6K6 122 aa14.56□□□□□ -0.08
SCUBE1-201ENST00000290460 Q6ZSN1 163 aa14.56□□□□□ -0.08
SCUBE1-201ENST00000290460 NFE4Q86UQ8 179 aa14.56□□□□□ -0.08
SCUBE1-201ENST00000290460 NIPBLQ6KC79 2804 aaeCLIP14.56□□□□□ -0.08
SCUBE1-201ENST00000290460 CEMP1Q6PRD7 247 aaPredicted RBP14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 C11orf44Q8N8P7 122 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 A0A0J9YXV3 536 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 TMEM238LA0A1B0GVL6 79 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 A6NJY4 79 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 APOMO95445 188 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 UBE2D1P51668 147 aa14.55□□□□□ -0.08
SCUBE1-201ENST00000290460 M0R2P5 195 aa14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 LRRC75A-AS1Q8N1F1 130 aa14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 CD28P10747 220 aa14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 LGALS3P17931 250 aaKnown RBP14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 DEFB114Q30KQ6 69 aa14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 VCX2Q9H322 139 aa14.54□□□□□ -0.08
SCUBE1-201ENST00000290460 TMEM223A0PJW6 202 aa14.53□□□□□ -0.08
SCUBE1-201ENST00000290460 ZNF22P17026 224 aaPredicted RBP14.53□□□□□ -0.08
SCUBE1-201ENST00000290460 LINC01587Q99440 93 aa14.53□□□□□ -0.08
SCUBE1-201ENST00000290460 RNASE13Q5GAN3 156 aaKnown RBP14.53□□□□□ -0.08
SCUBE1-201ENST00000290460 FAM104AQ969W3 186 aa14.53□□□□□ -0.08
SCUBE1-201ENST00000290460 IGHV3-30P01768 117 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 IGHV3-30-5P0DP03 117 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 ZNF415Q09FC8 603 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 Q6ZSV7 163 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 SLC25A29Q8N8R3 303 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 TNFRSF18Q9Y5U5 241 aa14.52□□□□□ -0.08
SCUBE1-201ENST00000290460 TRAV2A0A0B4J234 112 aa14.52□□□□□ -0.09
SCUBE1-201ENST00000290460 A8MWV9 139 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms