RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 RPL32P62910 135 aaKnown RBP10.12□□□□□ -0.79
SS18-201ENST00000269137 DEFB135Q30KP9 77 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 Q6ZTI0 123 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 IGHV1-24A0A0C4DH33 117 aa10.11□□□□□ -0.79
SS18-201ENST00000269137 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
SS18-201ENST00000269137 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
SS18-201ENST00000269137 H7C1H1 209 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 RNF183Q96D59 192 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 VAMP8Q9BV40 100 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 TRAV4A0A0B4J268 109 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 LURAP1LQ8IV03 231 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 OR4C5Q8NGB2 326 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 ST20Q9HBF5 79 aa10.1□□□□□ -0.79
SS18-201ENST00000269137 K7EMI3 77 aa10.09□□□□□ -0.79
SS18-201ENST00000269137 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
SS18-201ENST00000269137 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
SS18-201ENST00000269137 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
SS18-201ENST00000269137 OR11H2Q8NH07 326 aa10.09□□□□□ -0.79
SS18-201ENST00000269137 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
SS18-201ENST00000269137 CIDEAO60543 219 aa10.08□□□□□ -0.8
SS18-201ENST00000269137 PAM16Q9Y3D7 125 aa10.08□□□□□ -0.8
SS18-201ENST00000269137 A0A096LNJ9 63 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
SS18-201ENST00000269137 Q6ZSN1 163 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 TMEM70Q9BUB7 260 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 VCYO14598 125 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 MIFP14174 115 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 KPRPQ5T749 579 aaPredicted RBP10.07□□□□□ -0.8
SS18-201ENST00000269137 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
SS18-201ENST00000269137 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 SDHAF1A6NFY7 115 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 GAGE7O76087 117 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 HBDP02042 147 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 FCER1GP30273 86 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 EMP1P54849 157 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 LAGE3Q14657 143 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 MIEN1Q9BRT3 115 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
SS18-201ENST00000269137 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
SS18-201ENST00000269137 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 IGHV4-28A0A0C4DH34 117 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 TCAPO15273 167 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 Q8NAQ8 132 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
SS18-201ENST00000269137 SPATA45Q537H7 98 aa10.04□□□□□ -0.8
SS18-201ENST00000269137 P0DMU3 169 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 FAM231AP0DMU4 169 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 FAM231CP0DMU5 169 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 RIPPLY3P57055 190 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
SS18-201ENST00000269137 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
SS18-201ENST00000269137 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
SS18-201ENST00000269137 NEGR1Q7Z3B1 354 aa10.02□□□□□ -0.81
SS18-201ENST00000269137 I3L3M4 83 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 K7EQD1 137 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 NUDT3O95989 172 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 DEFB130BP0DP73 79 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 DEFB130AP0DP74 79 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 G0S2P27469 103 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 ATOH7Q8N100 152 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 Q9UF83 564 aa10.01□□□□□ -0.81
SS18-201ENST00000269137 TRAV9-2A0A087WT02 112 aa10□□□□□ -0.81
SS18-201ENST00000269137 TRBV6-4A0A1B0GX49 114 aa10□□□□□ -0.81
SS18-201ENST00000269137 EREGO14944 169 aa10□□□□□ -0.81
SS18-201ENST00000269137 FHL2Q14192 279 aa10□□□□□ -0.81
SS18-201ENST00000269137 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
SS18-201ENST00000269137 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
SS18-201ENST00000269137 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
SS18-201ENST00000269137 MAP1LC3CQ9BXW4 147 aa10□□□□□ -0.81
SS18-201ENST00000269137 C20orf202A1L168 122 aa10□□□□□ -0.81
SS18-201ENST00000269137 M0R143 59 aa10□□□□□ -0.81
SS18-201ENST00000269137 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 K7EIL1 84 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 DEFB4AO15263 64 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 TSHBP01222 138 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 RHOHQ15669 191 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 UQCR10Q9UDW1 63 aa9.99□□□□□ -0.81
SS18-201ENST00000269137 TRBV7-3A0A075B6L6 115 aa9.98□□□□□ -0.81
SS18-201ENST00000269137 MAJINQ3KP22 176 aa9.98□□□□□ -0.81
SS18-201ENST00000269137 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms