RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 KIR2DL5AQ8N109 375 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
TIMP3-201ENST00000266085 TRBV7-3A0A075B6L6 115 aa11.71□□□□□ -0.53
TIMP3-201ENST00000266085 INSL3P51460 131 aa11.71□□□□□ -0.53
TIMP3-201ENST00000266085 SLC25A29Q8N8R3 303 aa11.71□□□□□ -0.53
TIMP3-201ENST00000266085 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.54
TIMP3-201ENST00000266085 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.54
TIMP3-201ENST00000266085 IGLV2-8P01709 118 aa11.71□□□□□ -0.54
TIMP3-201ENST00000266085 ZNF80P51504 273 aaPredicted RBP11.71□□□□□ -0.54
TIMP3-201ENST00000266085 ANKRD39Q53RE8 183 aa11.71□□□□□ -0.54
TIMP3-201ENST00000266085 IGKV2D-24A0A075B6R9 120 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 C10orf99Q6UWK7 81 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 INAFM2P0DMQ5 153 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 HIST1H4AP62805 103 aaKnown RBP11.7□□□□□ -0.54
TIMP3-201ENST00000266085 LINC00322Q6ZN03 302 aaPredicted RBP11.7□□□□□ -0.54
TIMP3-201ENST00000266085 MLST8Q9BVC4 326 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
TIMP3-201ENST00000266085 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 Q6ZSV7 163 aa11.7□□□□□ -0.54
TIMP3-201ENST00000266085 PCNTO95613 3336 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 K7ERJ3 54 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 CRLF1O75462 422 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 MAP6D1Q9H9H5 199 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 A0A1W2PPM0 123 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 DEFB4AO15263 64 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 ZFAND6Q6FIF0 208 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
TIMP3-201ENST00000266085 TDRG1Q3Y452 100 aa11.68□□□□□ -0.54
TIMP3-201ENST00000266085 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
TIMP3-201ENST00000266085 SCRT2Q9NQ03 307 aa11.68□□□□□ -0.54
TIMP3-201ENST00000266085 K7EQG2 157 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 Q9HAA7 133 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 HERV-K104P63124 156 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 K7EP34 96 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 LGALS9O00182 355 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 TIMM17AQ99595 171 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
TIMP3-201ENST00000266085 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
TIMP3-201ENST00000266085 COL5A1P20908 1838 aaPredicted RBP11.67□□□□□ -0.54
TIMP3-201ENST00000266085 F8W1H4 67 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 SOCS3O14543 225 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 SMAD5-AS1Q9Y6J3 95 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 H3BMG7 143 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
TIMP3-201ENST00000266085 Q8N6K4 173 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 K7EP13 123 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 CFC1BP0CG36 223 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 CFC1P0CG37 223 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 LURAP1LQ8IV03 231 aa11.65□□□□□ -0.54
TIMP3-201ENST00000266085 PRSS47A8MTI9 375 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 NPSP0C0P6 89 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 CCL18P55774 89 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 KRTAP10-9P60411 292 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 TOMM6Q96B49 74 aa11.64□□□□□ -0.55
TIMP3-201ENST00000266085 IFITM1P13164 125 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 ODF3Q96PU9 254 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 IGLC6P0CF74 106 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 BAALCQ8WXS3 180 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 TMEM126AQ9H061 195 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 COX7A2LO14548 114 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 AVPP01185 164 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
TIMP3-201ENST00000266085 TTTY13Q9BZ97 58 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 LY6G6DO95868 133 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 Q6ZS46 218 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 PRO0255Q9UI72 69 aa11.62□□□□□ -0.55
TIMP3-201ENST00000266085 PLA2G2AP14555 144 aa11.61□□□□□ -0.55
TIMP3-201ENST00000266085 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
TIMP3-201ENST00000266085 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
TIMP3-201ENST00000266085 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
TIMP3-201ENST00000266085 ODF1Q14990 250 aa11.61□□□□□ -0.55
TIMP3-201ENST00000266085 IGHV3-30P01768 117 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 IGHV3-33P01772 117 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 IGHV3-30-5P0DP03 117 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 CAMK2N2Q96S95 79 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 PSMB8P28062 276 aa11.6□□□□□ -0.55
TIMP3-201ENST00000266085 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 E9PLD3 99 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 VSIG2Q96IQ7 327 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms