RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NOTCH2Q04721 2471 aa12.64□□□□□ -0.39
PHRF1-201ENST00000264555 A0A0J9YY99 117 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 DNAH12Q6ZR08 3092 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 IFITM1P13164 125 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 FXYD2P54710 66 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 GAGE2AQ6NT46 116 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 C20orf203Q8NBC4 194 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
PHRF1-201ENST00000264555 XCL1P47992 114 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 ATP6V0E2Q8NHE4 81 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 PSCAO43653 123 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 TAX1BP3O14907 124 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 GYPEP15421 78 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 U3KQK5 164 aa12.62□□□□□ -0.39
PHRF1-201ENST00000264555 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
PHRF1-201ENST00000264555 EML5Q05BV3 1969 aa12.61□□□□□ -0.39
PHRF1-201ENST00000264555 PIFOQ8TCI5 191 aa12.6□□□□□ -0.39
PHRF1-201ENST00000264555 TMEM263Q8WUH6 116 aaKnown RBP12.6□□□□□ -0.39
PHRF1-201ENST00000264555 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
PHRF1-201ENST00000264555 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
PHRF1-201ENST00000264555 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
PHRF1-201ENST00000264555 A4D1N5 150 aa12.59□□□□□ -0.39
PHRF1-201ENST00000264555 PSMB8P28062 276 aa12.59□□□□□ -0.39
PHRF1-201ENST00000264555 ATP5G1P05496 136 aa12.58□□□□□ -0.4
PHRF1-201ENST00000264555 SPART-AS1P0CW21 52 aa12.58□□□□□ -0.4
PHRF1-201ENST00000264555 Q6ZQT7 251 aa12.58□□□□□ -0.4
PHRF1-201ENST00000264555 C5orf38Q86SI9 138 aa12.58□□□□□ -0.4
PHRF1-201ENST00000264555 SOCS3O14543 225 aa12.58□□□□□ -0.4
PHRF1-201ENST00000264555 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 ZNF843Q8N446 348 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 TRBV10-1A0A0K0K1A3 114 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 NAV2Q8IVL1 2488 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
PHRF1-201ENST00000264555 WFDC11Q8NEX6 87 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 HIST1H4AP62805 103 aaKnown RBP12.57□□□□□ -0.4
PHRF1-201ENST00000264555 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
PHRF1-201ENST00000264555 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
PHRF1-201ENST00000264555 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
PHRF1-201ENST00000264555 INSL3P51460 131 aa12.56□□□□□ -0.4
PHRF1-201ENST00000264555 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 PSMG3-AS1Q96PY0 264 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
PHRF1-201ENST00000264555 CRLF1O75462 422 aa12.54□□□□□ -0.4
PHRF1-201ENST00000264555 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
PHRF1-201ENST00000264555 PTPN13Q12923 2485 aa12.54□□□□□ -0.4
PHRF1-201ENST00000264555 ICOSQ9Y6W8 199 aa12.54□□□□□ -0.4
PHRF1-201ENST00000264555 IGHV1-58A0A0C4DH39 117 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 NTN5Q8WTR8 489 aaPredicted RBP12.53□□□□□ -0.4
PHRF1-201ENST00000264555 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 COX7B2Q8TF08 81 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 RMI2Q96E14 147 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
PHRF1-201ENST00000264555 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.4
PHRF1-201ENST00000264555 Q6ZSV7 163 aa12.52□□□□□ -0.4
PHRF1-201ENST00000264555 ZNF702PQ9H963 129 aa12.52□□□□□ -0.4
PHRF1-201ENST00000264555 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.41
PHRF1-201ENST00000264555 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 F8WEM9 126 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 COX7A2LO14548 114 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 P0DMU3 169 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 FAM231AP0DMU4 169 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 FAM231CP0DMU5 169 aa12.51□□□□□ -0.41
PHRF1-201ENST00000264555 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
PHRF1-201ENST00000264555 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
PHRF1-201ENST00000264555 Q6ZS46 218 aa12.5□□□□□ -0.41
PHRF1-201ENST00000264555 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
PHRF1-201ENST00000264555 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
PHRF1-201ENST00000264555 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
PHRF1-201ENST00000264555 M0QY20 66 aa12.49□□□□□ -0.41
PHRF1-201ENST00000264555 PRR9Q5T870 116 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 Q6ZTI0 123 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 ANKRD29Q8N6D5 301 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 ARHGAP32A7KAX9 2087 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 Q6ZUT4 128 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 A0A1W2PPR1 153 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 KLLNB2CW77 178 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
PHRF1-201ENST00000264555 RNASE3P12724 160 aaKnown RBP12.47□□□□□ -0.41
PHRF1-201ENST00000264555 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 BAALC-AS2P0C853 105 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 C9orf153Q5TBE3 101 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 DAND5Q8N907 189 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 NRACQ8N912 160 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 ZMAT4Q9H898 229 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
PHRF1-201ENST00000264555 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
PHRF1-201ENST00000264555 CEP295Q9C0D2 2601 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms