RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 EGR2P11161 476 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-202ENST00000261517 C11orf71Q6IPW1 123 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 ZNF664Q8N3J9 261 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 U3KQE9 123 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 SNAI2O43623 268 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 DEFB121Q5J5C9 76 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 PSMG3-AS1Q96PY0 264 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 WT1P19544 449 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-202ENST00000261517 LMO4P61968 165 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 CCDC140Q96MF4 163 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 TFF1P04155 84 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 H3BMG7 143 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 UFSP1Q6NVU6 142 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 K7EP13 123 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE7O76087 117 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE12FP0CL80 117 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE12GP0CL81 117 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE12IP0CL82 117 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
VPS13C-202ENST00000261517 MPV17L2Q567V2 206 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 MORN5Q5VZ52 161 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 RNF144BQ7Z419 303 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 COX7B2Q8TF08 81 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 EYSQ5T1H1 3165 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 PRSS29PA6NIE9 313 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 COX17Q14061 63 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 FGF23Q9GZV9 251 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-202ENST00000261517 TPSG1Q9NRR2 321 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 C9JAW5 83 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 NDUFB1O75438 58 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 PCP4P48539 62 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 CYYR1Q96J86 154 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 MUC21A0A0G2JKD1 596 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 MUC21A0A140T8X8 626 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 hDV102S1A0JD36 115 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00527Q9UJ94 153 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 Q8N7P7 452 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ZNF524Q96C55 264 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 A0A1B0GX51 115 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 IGLV2-14P01704 120 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 CFC1BP0CG36 223 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 CFC1P0CG37 223 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 TRBV6-5A0A0K0K1A5 114 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 HHLA3Q9XRX5 114 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 DSCAML1Q8TD84 2053 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 K7EN84 100 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ADAMTSL5Q6ZMM2 481 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 DEFB125Q8N687 156 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 FGF6P10767 208 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 FAM222AQ5U5X8 452 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 NOP10Q9NPE3 64 aaKnown RBP3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ZNF581Q9P0T4 197 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00474Q9P2X8 69 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 U3KQK5 164 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 TIRAPP58753 221 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 MRPS36P82909 103 aaKnown RBP3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ZNF124Q15973 351 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00467Q9BRT7 94 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 CHD6Q8TD26 2715 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 DUX4L9Q6RFH8 374 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-202ENST00000261517 CNFNQ9BYD5 112 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 MUC3AQ02505 3323 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 A0A0B4J2C4 111 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 SPRY2O43597 315 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 SCRT2Q9NQ03 307 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 TNRC18O15417 2968 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-202ENST00000261517 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 TRBV6-4A0A1B0GX49 114 aa3.31□□□□□ -1.88
VPS13C-202ENST00000261517 SPANXB1Q9NS25 103 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-202ENST00000261517 GYPEP15421 78 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 GFI1BQ5VTD9 330 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 Q8N6K4 173 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 C12orf74Q32Q52 190 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 LINC01561Q8N1V8 128 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 KNCNA6PVL3 124 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 HILS1P60008 231 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 TMEM258P61165 79 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 PRR31Q5SQ13 230 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 K7EQG2 157 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 MLANAQ16655 118 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 FANCD2OSQ96PS1 177 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 ATOX1O00244 68 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE6Q13070 117 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 KLK9Q9UKQ9 250 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4-38-2P0DP08 117 aa3.3□□□□□ -1.88
VPS13C-202ENST00000261517 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms