RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
SDCBP-201ENST00000260130 K7EP13 123 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 LENEPQ9Y5L5 61 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
SDCBP-201ENST00000260130 LOC389332A0A1B0GUA5 103 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-201ENST00000260130 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 LGALS9BQ3B8N2 356 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 MRPL51Q4U2R6 128 aaKnown RBP11.98□□□□□ -0.49
SDCBP-201ENST00000260130 MUC21Q5SSG8 566 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 LGALS9CQ6DKI2 356 aa11.98□□□□□ -0.49
SDCBP-201ENST00000260130 TENM2Q9NT68 2774 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 DYNC2H1Q8NCM8 4307 aaKnown RBP11.97□□□□□ -0.49
SDCBP-201ENST00000260130 A0A096LNJ9 63 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 NCR2O95944 276 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 HBDP02042 147 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 C12orf74Q32Q52 190 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 PRR9Q5T870 116 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
SDCBP-201ENST00000260130 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.49
SDCBP-201ENST00000260130 CKS2P33552 79 aa11.96□□□□□ -0.49
SDCBP-201ENST00000260130 TWIST1Q15672 202 aa11.96□□□□□ -0.49
SDCBP-201ENST00000260130 Q6ZTC4 211 aa11.96□□□□□ -0.49
SDCBP-201ENST00000260130 C16orf74Q96GX8 76 aa11.96□□□□□ -0.49
SDCBP-201ENST00000260130 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.5
SDCBP-201ENST00000260130 PLAC8L1A1L4L8 177 aa11.95□□□□□ -0.5
SDCBP-201ENST00000260130 IGLC6P0CF74 106 aa11.95□□□□□ -0.5
SDCBP-201ENST00000260130 RNASE8Q8TDE3 154 aaKnown RBP11.95□□□□□ -0.5
SDCBP-201ENST00000260130 KLK5Q9Y337 293 aaPredicted RBP11.95□□□□□ -0.5
SDCBP-201ENST00000260130 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
SDCBP-201ENST00000260130 SEC11AP67812 179 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 C2orf91Q6ZV80 131 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 LYRM9A8MSI8 78 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 PPBPP02775 128 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 ZNF80P51504 273 aaPredicted RBP11.94□□□□□ -0.5
SDCBP-201ENST00000260130 Q6ZQT7 251 aa11.94□□□□□ -0.5
SDCBP-201ENST00000260130 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
SDCBP-201ENST00000260130 CBY3A6NI87 242 aa11.93□□□□□ -0.5
SDCBP-201ENST00000260130 NPYP01303 97 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 ORM1P02763 201 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 CACNG7P62955 275 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
SDCBP-201ENST00000260130 IGHV1OR15-1A0A075B7D0 117 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 FGF6P10767 208 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 DAD1P61803 113 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 ANXA2RQ3ZCQ2 193 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 NOP10Q9NPE3 64 aaKnown RBP11.91□□□□□ -0.5
SDCBP-201ENST00000260130 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 BOD1L2Q8IYS8 172 aa11.91□□□□□ -0.5
SDCBP-201ENST00000260130 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 SIVA1O15304 175 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 RBX1P62877 108 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 LINC01559Q495D7 138 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 ERASQ7Z444 233 aa11.9□□□□□ -0.5
SDCBP-201ENST00000260130 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 SNAI2O43623 268 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 LYSTQ99698 3801 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 A6NDN8 102 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 RNF185Q96GF1 192 aa11.89□□□□□ -0.51
SDCBP-201ENST00000260130 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
SDCBP-201ENST00000260130 IGLL5B9A064 214 aa11.88□□□□□ -0.51
SDCBP-201ENST00000260130 FAM159AQ6UWV7 190 aa11.88□□□□□ -0.51
SDCBP-201ENST00000260130 C11orf72Q8NBR9 251 aa11.88□□□□□ -0.51
SDCBP-201ENST00000260130 PCP4P48539 62 aa11.88□□□□□ -0.51
SDCBP-201ENST00000260130 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
SDCBP-201ENST00000260130 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
SDCBP-201ENST00000260130 HSD52Q0P140 79 aa11.87□□□□□ -0.51
SDCBP-201ENST00000260130 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
SDCBP-201ENST00000260130 SACSQ9NZJ4 4579 aa11.87□□□□□ -0.51
SDCBP-201ENST00000260130 FCER1GP30273 86 aa11.86□□□□□ -0.51
SDCBP-201ENST00000260130 TNFRSF6BO95407 300 aa11.86□□□□□ -0.51
SDCBP-201ENST00000260130 TCTAP57738 103 aa11.86□□□□□ -0.51
SDCBP-201ENST00000260130 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
SDCBP-201ENST00000260130 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
SDCBP-201ENST00000260130 LCE6AA0A183 80 aa11.85□□□□□ -0.51
SDCBP-201ENST00000260130 H3BRM9 83 aa11.85□□□□□ -0.51
SDCBP-201ENST00000260130 HTN3P15516 51 aa11.85□□□□□ -0.51
SDCBP-201ENST00000260130 LINC00612Q8N6U2 182 aa11.85□□□□□ -0.51
SDCBP-201ENST00000260130 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
SDCBP-201ENST00000260130 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms