RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FAM231CP0DMU5 169 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 UBE2D3P61077 147 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 UBE2D2P62837 147 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
VPS25-201ENST00000253794 ELOBQ15370 118 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 AMN1Q8IY45 258 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
VPS25-201ENST00000253794 URGCP-MRPS24S4R325 110 aa9.76□□□□□ -0.85
VPS25-201ENST00000253794 TRBV6-5A0A0K0K1A5 114 aa9.75□□□□□ -0.85
VPS25-201ENST00000253794 COX19Q49B96 90 aa9.75□□□□□ -0.85
VPS25-201ENST00000253794 NIT2Q9NQR4 276 aa9.75□□□□□ -0.85
VPS25-201ENST00000253794 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
VPS25-201ENST00000253794 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 GAGE12JA6NER3 117 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 GAGE1Q13065 139 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 GAGE4Q13068 117 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 GAGE5Q13069 117 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 MRPL51Q4U2R6 128 aaKnown RBP9.74□□□□□ -0.85
VPS25-201ENST00000253794 GAGE13Q4V321 117 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 TMEM136Q6ZRR5 245 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 GNB1LQ9BYB4 327 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 SMCO4Q9NRQ5 59 aa9.74□□□□□ -0.85
VPS25-201ENST00000253794 KMT2CQ8NEZ4 4911 aaKnown RBP9.74□□□□□ -0.85
VPS25-201ENST00000253794 PPBPP02775 128 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 ESRGQ1W209 222 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 LYPD5Q6UWN5 251 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
VPS25-201ENST00000253794 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 PPP1R17O96001 155 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 MT-ND6P03923 174 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 CCL18P55774 89 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 DAZ4Q86SG3 579 aaKnown RBP9.72□□□□□ -0.85
VPS25-201ENST00000253794 NRACQ8N912 160 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 DAZ3Q9NR90 486 aaKnown RBP9.72□□□□□ -0.85
VPS25-201ENST00000253794 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
VPS25-201ENST00000253794 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 TNFRSF18Q9Y5U5 241 aa9.72□□□□□ -0.85
VPS25-201ENST00000253794 TGIF2-C20orf24A0A0A6YYL0 155 aa9.71□□□□□ -0.86
VPS25-201ENST00000253794 GAS8-AS1O95177 125 aa9.71□□□□□ -0.86
VPS25-201ENST00000253794 S100A1P23297 94 aa9.71□□□□□ -0.86
VPS25-201ENST00000253794 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.86
VPS25-201ENST00000253794 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
VPS25-201ENST00000253794 PHOX2AO14813 284 aa9.7□□□□□ -0.86
VPS25-201ENST00000253794 RPS10P46783 165 aaKnown RBP9.7□□□□□ -0.86
VPS25-201ENST00000253794 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
VPS25-201ENST00000253794 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
VPS25-201ENST00000253794 LCE6AA0A183 80 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 D6R8Y8 96 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 CKS2P33552 79 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 POLR2KP53803 58 aaKnown RBP9.69□□□□□ -0.86
VPS25-201ENST00000253794 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 LELP1Q5T871 98 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.69□□□□□ -0.86
VPS25-201ENST00000253794 C20orf78Q9BR46 151 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
VPS25-201ENST00000253794 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
VPS25-201ENST00000253794 TRBV27A0A0K0K1C4 114 aa9.68□□□□□ -0.86
VPS25-201ENST00000253794 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
VPS25-201ENST00000253794 NCR2O95944 276 aa9.68□□□□□ -0.86
VPS25-201ENST00000253794 TMEM70Q9BUB7 260 aa9.68□□□□□ -0.86
VPS25-201ENST00000253794 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
VPS25-201ENST00000253794 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
VPS25-201ENST00000253794 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
VPS25-201ENST00000253794 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
VPS25-201ENST00000253794 APCSP02743 223 aa9.66□□□□□ -0.86
VPS25-201ENST00000253794 SUMO2P61956 95 aaKnown RBP9.66□□□□□ -0.86
VPS25-201ENST00000253794 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
VPS25-201ENST00000253794 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
VPS25-201ENST00000253794 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
VPS25-201ENST00000253794 NPYP01303 97 aa9.65□□□□□ -0.86
VPS25-201ENST00000253794 IQCJQ1A5X6 159 aa9.65□□□□□ -0.86
VPS25-201ENST00000253794 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
VPS25-201ENST00000253794 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 COLCA2A8K830 154 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 I3L3M4 83 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 VCYO14598 125 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 LY6G6CO95867 125 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 RYR2Q92736 4967 aa9.64□□□□□ -0.87
VPS25-201ENST00000253794 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 SIVA1O15304 175 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 COTL1Q14019 142 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 SMIM2Q9BVW6 85 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 Q9H8V8 135 aa9.63□□□□□ -0.87
VPS25-201ENST00000253794 IGLV2-18A0A075B6J9 118 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 K7EP13 123 aa9.62□□□□□ -0.87
VPS25-201ENST00000253794 TCAPO15273 167 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms