RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CHCHD7Q9BUK0 85 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
VPS50-201ENST00000251739 FAM74A7A6NL05 159 aa6.74□□□□□ -1.33
VPS50-201ENST00000251739 GIPP09681 153 aaPredicted RBP6.74□□□□□ -1.33
VPS50-201ENST00000251739 ARMS2P0C7Q2 107 aa6.74□□□□□ -1.33
VPS50-201ENST00000251739 LINC01620Q4KN68 170 aa6.74□□□□□ -1.33
VPS50-201ENST00000251739 HIST1H2BAQ96A08 127 aa6.74□□□□□ -1.33
VPS50-201ENST00000251739 SFRP2Q96HF1 295 aa6.74□□□□□ -1.33
VPS50-201ENST00000251739 NKX6-2Q9C056 277 aaPredicted RBP6.74□□□□□ -1.33
VPS50-201ENST00000251739 TRBV10-1A0A0K0K1A3 114 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 TRBV6-1A0A0K0K1D8 114 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 G3V3Q6 166 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 SH2D1AO60880 128 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 UBE2G2P60604 165 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 ZNF674Q2M3X9 581 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 COMMD7Q86VX2 200 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 Q8N976 141 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 OR11H4Q8NGC9 324 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 DEFB104AQ8WTQ1 72 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 RMI2Q96E14 147 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 CHAC1Q9BUX1 264 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 MED28Q9H204 178 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 ZFP30Q9Y2G7 519 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 UBR4Q5T4S7 5183 aa6.73□□□□□ -1.33
VPS50-201ENST00000251739 A0A087WWL8 130 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 RAB19A4D1S5 217 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 M0R036 132 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 LTAP01374 205 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 SEC11BP0C7V7 166 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 UBE2D3P61077 147 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 UBE2D2P62837 147 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 FAM162BQ5T6X4 162 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 FAM74A4Q5TZK3 123 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 OR10G8Q8NGN5 311 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 FMC1Q96HJ9 113 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 KLK12Q9UKR0 248 aa6.72□□□□□ -1.33
VPS50-201ENST00000251739 IGKV2D-24A0A075B6R9 120 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 BORCS7-ASMTA0A0B4J1R7 106 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 FHITP49789 147 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 TEX261Q6UWH6 196 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
VPS50-201ENST00000251739 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 PHLDA3Q9Y5J5 127 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 URGCP-MRPS24S4R325 110 aa6.71□□□□□ -1.34
VPS50-201ENST00000251739 MAP1LC3B2A6NCE7 125 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 RBFOX3A6NFN3 312 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 M0R381 172 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 TPT1P13693 172 aaKnown RBP6.7□□□□□ -1.34
VPS50-201ENST00000251739 PRR27Q6MZM9 219 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 ZFP82Q8N141 532 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 UBE2WQ96B02 151 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 MAP1LC3BQ9GZQ8 125 aa6.7□□□□□ -1.34
VPS50-201ENST00000251739 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 A0A087WX48 190 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 FXYD6-FXYD2A0A087WZ82 144 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 IGLV2-8P01709 118 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 CXCL1P09341 107 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 RPL35P42766 123 aaKnown RBP6.69□□□□□ -1.34
VPS50-201ENST00000251739 RPL36AP83881 106 aaKnown RBP6.69□□□□□ -1.34
VPS50-201ENST00000251739 ELOBQ15370 118 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 ENHOQ6UWT2 76 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 RPL36ALQ969Q0 106 aaKnown RBP6.69□□□□□ -1.34
VPS50-201ENST00000251739 CYTL1Q9NRR1 136 aa6.69□□□□□ -1.34
VPS50-201ENST00000251739 TMSB15BA0A087X1C1 80 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 TRBV6-8A0A0A6YYG3 113 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 LINC00587B1AMM8 73 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 RAB5BP61020 215 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 UBE2G1P62253 170 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 Q0VG73 95 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 AKR1C8PQ5T2L2 129 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
VPS50-201ENST00000251739 TEX46H3BTG2 121 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 SNAI2O43623 268 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 OXTP01178 125 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 OR10AG1Q8NH19 301 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 MLST8Q9BVC4 326 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 VAX2Q9UIW0 290 aa6.67□□□□□ -1.34
VPS50-201ENST00000251739 PRSS47A8MTI9 375 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 OR5AL1P0C617 328 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 AKR1C3P42330 323 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 RPL19P84098 196 aaKnown RBP6.66□□□□□ -1.34
VPS50-201ENST00000251739 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 KIF25-AS1Q9Y6Z4 181 aa6.66□□□□□ -1.34
VPS50-201ENST00000251739 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 MIAQ16674 131 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 CST9LP1Q5W188 147 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 NTM-AS1Q6ZSK4 140 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 C15orf54Q8N8G6 183 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 SFT2D1Q8WV19 159 aa6.65□□□□□ -1.34
VPS50-201ENST00000251739 NIT2Q9NQR4 276 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms