RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ITPR3Q14573 2671 aa15.52■□□□□ 0.08
CCDC130-201ENST00000221554 C11orf86A6NJI1 115 aa15.52■□□□□ 0.08
CCDC130-201ENST00000221554 I3L3M4 83 aa15.52■□□□□ 0.08
CCDC130-201ENST00000221554 TMEM238LA0A1B0GVL6 79 aa15.52■□□□□ 0.07
CCDC130-201ENST00000221554 A0A1B0GWB2 263 aa15.52■□□□□ 0.07
CCDC130-201ENST00000221554 A6NJY4 79 aa15.52■□□□□ 0.07
CCDC130-201ENST00000221554 C12orf74Q32Q52 190 aa15.52■□□□□ 0.07
CCDC130-201ENST00000221554 SVEP1Q4LDE5 3571 aa15.51■□□□□ 0.07
CCDC130-201ENST00000221554 IGLV4-69A0A075B6H9 119 aa15.51■□□□□ 0.07
CCDC130-201ENST00000221554 ZNF815PA8K554 130 aa15.51■□□□□ 0.07
CCDC130-201ENST00000221554 SLURP1P55000 103 aa15.51■□□□□ 0.07
CCDC130-201ENST00000221554 DEFB131AP59861 70 aa15.51■□□□□ 0.07
CCDC130-201ENST00000221554 H3BMM0 161 aa15.5■□□□□ 0.07
CCDC130-201ENST00000221554 SPAG8Q99932 426 aaPredicted RBP15.5■□□□□ 0.07
CCDC130-201ENST00000221554 LINC00467Q9BRT7 94 aa15.5■□□□□ 0.07
CCDC130-201ENST00000221554 MORN3Q6PF18 240 aaPredicted RBP15.49■□□□□ 0.07
CCDC130-201ENST00000221554 Q96MF0 132 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 NAA38Q9BRA0 125 aaKnown RBP15.49■□□□□ 0.07
CCDC130-201ENST00000221554 ZANQ9Y493 2812 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 MAST4O15021 2626 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 A8MWV9 139 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 IGLL5B9A064 214 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 RPL39P62891 51 aaKnown RBP15.49■□□□□ 0.07
CCDC130-201ENST00000221554 OTOGQ6ZRI0 2925 aa15.49■□□□□ 0.07
CCDC130-201ENST00000221554 CSPG4Q6UVK1 2322 aa15.48■□□□□ 0.07
CCDC130-201ENST00000221554 CYSRT1A8MQ03 144 aa15.48■□□□□ 0.07
CCDC130-201ENST00000221554 SCGB1D4Q6XE38 83 aa15.48■□□□□ 0.07
CCDC130-201ENST00000221554 NFE4Q86UQ8 179 aa15.48■□□□□ 0.07
CCDC130-201ENST00000221554 CREBBPQ92793 2442 aa15.48■□□□□ 0.07
CCDC130-201ENST00000221554 C20orf203Q8NBC4 194 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 DYNLRB2Q8TF09 96 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 CLUHP3Q96NS8 147 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 FLNAP21333 2647 aaKnown RBP15.47■□□□□ 0.07
CCDC130-201ENST00000221554 ZNF469Q96JG9 3925 aaPredicted RBP15.47■□□□□ 0.07
CCDC130-201ENST00000221554 CR1P17927 2039 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 KNCNA6PVL3 124 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 M0R2P5 195 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 ZNF415Q09FC8 603 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 CD300EQ496F6 205 aaPredicted RBP15.47■□□□□ 0.07
CCDC130-201ENST00000221554 ZNF479Q96JC4 524 aa15.47■□□□□ 0.07
CCDC130-201ENST00000221554 K7ERJ3 54 aa15.46■□□□□ 0.07
CCDC130-201ENST00000221554 CRYBA4P53673 196 aa15.46■□□□□ 0.07
CCDC130-201ENST00000221554 ACANP16112 2415 aa15.45■□□□□ 0.06
CCDC130-201ENST00000221554 RNF151Q2KHN1 245 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 RAX2Q96IS3 184 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 DUX3Q96PT4 197 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 PYGO1Q9Y3Y4 419 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 TRAV25A0A0B4J276 109 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 SRSF9Q13242 221 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC130-201ENST00000221554 DEFB136Q30KP8 78 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 TMEM170BQ5T4T1 132 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 TMEM61Q8N0U2 210 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 SPXQ9BT56 116 aa15.44■□□□□ 0.06
CCDC130-201ENST00000221554 SPANXB1Q9NS25 103 aaPredicted RBP15.44■□□□□ 0.06
CCDC130-201ENST00000221554 RRN3P1Q2M238 152 aa15.43■□□□□ 0.06
CCDC130-201ENST00000221554 C18orf65Q6ZTR6 163 aa15.43■□□□□ 0.06
CCDC130-201ENST00000221554 VPS25Q9BRG1 176 aa15.43■□□□□ 0.06
CCDC130-201ENST00000221554 RHODO00212 210 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 RBMY1A1P0DJD3 496 aaKnown RBP15.42■□□□□ 0.06
CCDC130-201ENST00000221554 RBMY1CP0DJD4 496 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 P0DMU3 169 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 FAM231AP0DMU4 169 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 FAM231CP0DMU5 169 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 RBMY1FQ15415 496 aaKnown RBP15.42■□□□□ 0.06
CCDC130-201ENST00000221554 DEFB114Q30KQ6 69 aa15.42■□□□□ 0.06
CCDC130-201ENST00000221554 F8W1H4 67 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 KLHL30-AS1Q8NEE0 82 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 DLX4Q92988 240 aaPredicted RBP15.41■□□□□ 0.06
CCDC130-201ENST00000221554 VCX2Q9H322 139 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 MAP6D1Q9H9H5 199 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 TNFRSF18Q9Y5U5 241 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 KHDC1LQ5JSQ8 128 aa15.41■□□□□ 0.06
CCDC130-201ENST00000221554 ZNRF2Q8NHG8 242 aa15.4■□□□□ 0.06
CCDC130-201ENST00000221554 DNAJC30Q96LL9 226 aa15.4■□□□□ 0.06
CCDC130-201ENST00000221554 TLN2Q9Y4G6 2542 aa15.4■□□□□ 0.06
CCDC130-201ENST00000221554 A0A0J9YY99 117 aa15.39■□□□□ 0.05
CCDC130-201ENST00000221554 LEPROTO15243 131 aa15.39■□□□□ 0.05
CCDC130-201ENST00000221554 INSP01308 110 aa15.39■□□□□ 0.05
CCDC130-201ENST00000221554 LGALS3P17931 250 aaKnown RBP15.39■□□□□ 0.05
CCDC130-201ENST00000221554 KRTAP1-3Q8IUG1 177 aa15.39■□□□□ 0.05
CCDC130-201ENST00000221554 RBMY1BA6NDE4 496 aaKnown RBP15.39■□□□□ 0.05
CCDC130-201ENST00000221554 RBMY1EA6NEQ0 496 aaKnown RBP15.39■□□□□ 0.05
CCDC130-201ENST00000221554 RBMY1DP0C7P1 496 aaKnown RBP15.39■□□□□ 0.05
CCDC130-201ENST00000221554 ZFHX3Q15911 3703 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 G3V4G9 280 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 J3QQQ9 107 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 PCP4P48539 62 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 SLC25A29Q8N8R3 303 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 PLEKHB2Q96CS7 222 aa15.38■□□□□ 0.05
CCDC130-201ENST00000221554 TMEM223A0PJW6 202 aa15.37■□□□□ 0.05
CCDC130-201ENST00000221554 HTN1P15515 57 aa15.37■□□□□ 0.05
CCDC130-201ENST00000221554 UBE2D1P51668 147 aa15.37■□□□□ 0.05
CCDC130-201ENST00000221554 EMP1P54849 157 aa15.37■□□□□ 0.05
CCDC130-201ENST00000221554 LINC01587Q99440 93 aa15.37■□□□□ 0.05
CCDC130-201ENST00000221554 IGLV4-3A0A075B6K6 122 aa15.36■□□□□ 0.05
CCDC130-201ENST00000221554 BEAN1Q3B7T3 259 aa15.36■□□□□ 0.05
CCDC130-201ENST00000221554 Q6ZSV7 163 aa15.36■□□□□ 0.05
CCDC130-201ENST00000221554 LYRM7Q5U5X0 104 aa15.36■□□□□ 0.05
CCDC130-201ENST00000221554 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
CCDC130-201ENST00000221554 HIVEP1P15822 2718 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms