RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 C5orf64Q2M2E5 130 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.46□□□□□ -0.73
SCARB2-227ENST00000640957 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.74
SCARB2-227ENST00000640957 LINC00477Q96M19 166 aa10.46□□□□□ -0.74
SCARB2-227ENST00000640957 NDUFV3P56181 108 aaKnown RBP10.45□□□□□ -0.74
SCARB2-227ENST00000640957 C16orf92Q96LL3 132 aa10.45□□□□□ -0.74
SCARB2-227ENST00000640957 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
SCARB2-227ENST00000640957 UBE2D3P61077 147 aa10.45□□□□□ -0.74
SCARB2-227ENST00000640957 UBE2D2P62837 147 aa10.45□□□□□ -0.74
SCARB2-227ENST00000640957 CRYGDP07320 174 aa10.45□□□□□ -0.74
SCARB2-227ENST00000640957 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
SCARB2-227ENST00000640957 IGKV3-20P01619 116 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-227ENST00000640957 Q8N1Y9 231 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 DUX3Q96PT4 197 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
SCARB2-227ENST00000640957 UTP20O75691 2785 aaKnown RBP10.43□□□□□ -0.74
SCARB2-227ENST00000640957 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-227ENST00000640957 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
SCARB2-227ENST00000640957 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 BUB3O43684 328 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE7O76087 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 GAGE4Q13068 117 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 TSHBP01222 138 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 PSMG3-AS1Q96PY0 264 aa10.43□□□□□ -0.74
SCARB2-227ENST00000640957 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
SCARB2-227ENST00000640957 MUC4Q99102 2169 aa10.42□□□□□ -0.74
SCARB2-227ENST00000640957 COX6B1P14854 86 aa10.42□□□□□ -0.74
SCARB2-227ENST00000640957 ORMDL2Q53FV1 153 aa10.42□□□□□ -0.74
SCARB2-227ENST00000640957 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
SCARB2-227ENST00000640957 CLPSL1A2RUU4 121 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 A0A0U1RRA0 63 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 A8MZ25 164 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 K7ENP7 123 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 NAV2Q8IVL1 2488 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 IFITM1P13164 125 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
SCARB2-227ENST00000640957 ZNF56Q15929 161 aa10.41□□□□□ -0.74
SCARB2-227ENST00000640957 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
SCARB2-227ENST00000640957 KAAG1Q9UBP8 84 aa10.4□□□□□ -0.74
SCARB2-227ENST00000640957 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
SCARB2-227ENST00000640957 VMO1Q7Z5L0 202 aa10.4□□□□□ -0.74
SCARB2-227ENST00000640957 DAND5Q8N907 189 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 CLEC2BQ92478 149 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 HTN1P15515 57 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 ABCA2Q9BZC7 2435 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 J3QQQ9 107 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 C8orf31Q8N9H6 132 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 CITED1Q99966 193 aa10.39□□□□□ -0.75
SCARB2-227ENST00000640957 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 RHODO00212 210 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 ATP6V0E1O15342 81 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 HERVK_113P61574 105 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 SPXQ9BT56 116 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 IGHV7-81A0A0B4J1V7 117 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 LY6LH3BQJ8 138 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 LY6EQ16553 131 aa10.38□□□□□ -0.75
SCARB2-227ENST00000640957 ZNF462Q96JM2 2506 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 RS1O15537 224 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 CEMP1Q6PRD7 247 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-227ENST00000640957 SLC50A1Q9BRV3 221 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
SCARB2-227ENST00000640957 RNF223E7ERA6 249 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 BRI3O95415 125 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 TRBV12-3P01733 135 aa10.37□□□□□ -0.75
SCARB2-227ENST00000640957 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 ASIPP42127 132 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 COX8CQ7Z4L0 72 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 CCDC140Q96MF4 163 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 VCX2Q9H322 139 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
SCARB2-227ENST00000640957 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms