RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 M0R381 172 aa11.98□□□□□ -0.49
PTPN11-207ENST00000639857 EREGO14944 169 aa11.98□□□□□ -0.49
PTPN11-207ENST00000639857 OR5AL1P0C617 328 aa11.98□□□□□ -0.49
PTPN11-207ENST00000639857 A0A087WWC5 75 aa11.97□□□□□ -0.49
PTPN11-207ENST00000639857 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
PTPN11-207ENST00000639857 SNAI2O43623 268 aa11.97□□□□□ -0.49
PTPN11-207ENST00000639857 FAM74A4Q5TZK3 123 aa11.97□□□□□ -0.49
PTPN11-207ENST00000639857 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
PTPN11-207ENST00000639857 SSBP4Q9BWG4 385 aaPredicted RBP11.97□□□□□ -0.49
PTPN11-207ENST00000639857 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
PTPN11-207ENST00000639857 BCL2P10415 239 aa11.96□□□□□ -0.49
PTPN11-207ENST00000639857 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
PTPN11-207ENST00000639857 PRR27Q6MZM9 219 aa11.96□□□□□ -0.49
PTPN11-207ENST00000639857 C14orf178Q8N769 122 aaPredicted RBP11.96□□□□□ -0.49
PTPN11-207ENST00000639857 DERL1Q9BUN8 251 aa11.96□□□□□ -0.49
PTPN11-207ENST00000639857 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
PTPN11-207ENST00000639857 GAGE1Q13065 139 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 GAGE4Q13068 117 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 GAGE5Q13069 117 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 LAGE3Q14657 143 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 VAX2Q9UIW0 290 aa11.95□□□□□ -0.5
PTPN11-207ENST00000639857 A0A087WWL8 130 aa11.94□□□□□ -0.5
PTPN11-207ENST00000639857 GNG4P50150 75 aa11.94□□□□□ -0.5
PTPN11-207ENST00000639857 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
PTPN11-207ENST00000639857 BIN3Q9NQY0 253 aa11.94□□□□□ -0.5
PTPN11-207ENST00000639857 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
PTPN11-207ENST00000639857 KRTAP10-2P60368 255 aa11.93□□□□□ -0.5
PTPN11-207ENST00000639857 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
PTPN11-207ENST00000639857 RAB4BP61018 213 aa11.93□□□□□ -0.5
PTPN11-207ENST00000639857 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
PTPN11-207ENST00000639857 hCG_2014768A0A024R1R8 64 aa11.92□□□□□ -0.5
PTPN11-207ENST00000639857 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
PTPN11-207ENST00000639857 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
PTPN11-207ENST00000639857 DAZAP1Q96EP5 407 aaKnown RBP11.92□□□□□ -0.5
PTPN11-207ENST00000639857 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
PTPN11-207ENST00000639857 A0A087WTM6 91 aa11.91□□□□□ -0.5
PTPN11-207ENST00000639857 C19orf71A6NCJ1 209 aa11.91□□□□□ -0.5
PTPN11-207ENST00000639857 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
PTPN11-207ENST00000639857 OR10G8Q8NGN5 311 aa11.91□□□□□ -0.5
PTPN11-207ENST00000639857 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
PTPN11-207ENST00000639857 Q9UF83 564 aa11.91□□□□□ -0.5
PTPN11-207ENST00000639857 TRBV7-3A0A075B6L6 115 aa11.9□□□□□ -0.5
PTPN11-207ENST00000639857 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
PTPN11-207ENST00000639857 BLOC1S1P78537 153 aa11.9□□□□□ -0.5
PTPN11-207ENST00000639857 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
PTPN11-207ENST00000639857 LRP1BQ9NZR2 4599 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 UBE2D3P61077 147 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 UBE2D2P62837 147 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 ZNF56Q15929 161 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 TOR2AQ5JU69 321 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
PTPN11-207ENST00000639857 PSCAO43653 123 aa11.88□□□□□ -0.51
PTPN11-207ENST00000639857 P01737 135 aa11.88□□□□□ -0.51
PTPN11-207ENST00000639857 FER1L6-AS1Q8NA97 138 aa11.88□□□□□ -0.51
PTPN11-207ENST00000639857 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
PTPN11-207ENST00000639857 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
PTPN11-207ENST00000639857 RYR1P21817 5038 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 F2Z2F3 143 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 CACNG7P62955 275 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 ALKAL2Q6UX46 152 aa11.87□□□□□ -0.51
PTPN11-207ENST00000639857 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
PTPN11-207ENST00000639857 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
PTPN11-207ENST00000639857 TM2D2Q9BX73 214 aa11.86□□□□□ -0.51
PTPN11-207ENST00000639857 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
PTPN11-207ENST00000639857 NIT1Q86X76 327 aa11.85□□□□□ -0.51
PTPN11-207ENST00000639857 NEXN-AS1Q8NBZ9 246 aa11.85□□□□□ -0.51
PTPN11-207ENST00000639857 Q9HAA7 133 aa11.85□□□□□ -0.51
PTPN11-207ENST00000639857 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
PTPN11-207ENST00000639857 HSPG2P98160 4391 aa11.84□□□□□ -0.51
PTPN11-207ENST00000639857 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
PTPN11-207ENST00000639857 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
PTPN11-207ENST00000639857 MUC21A0A0G2JKD1 596 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 MUC21A0A140T8X8 626 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 RBFOX3A6NFN3 312 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 F5H697 171 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 GZMBP10144 247 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 NTN5Q8WTR8 489 aaPredicted RBP11.83□□□□□ -0.52
PTPN11-207ENST00000639857 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 COX11Q9Y6N1 276 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 DNAH5Q8TE73 4624 aa11.83□□□□□ -0.52
PTPN11-207ENST00000639857 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
PTPN11-207ENST00000639857 H7C1H1 209 aa11.82□□□□□ -0.52
PTPN11-207ENST00000639857 TRGC1P0CF51 173 aa11.82□□□□□ -0.52
PTPN11-207ENST00000639857 CTRLP40313 264 aa11.82□□□□□ -0.52
PTPN11-207ENST00000639857 PKIAP61925 76 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms