RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 USF3Q68DE3 2245 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 BVES-AS1Q5T3Y7 98 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 A0A1W2PPM0 123 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 IGHV2-5P01817 119 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 NDUFA1O15239 70 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 J3QLI3 93 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 Q8TCH9 128 aa13.23□□□□□ -0.29
CACNA1A-253ENST00000637927 FHL1Q13642 323 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 Q8N9W7 124 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 LINC01559Q495D7 138 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM236AA0A1B0GUQ0 79 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM236BA0A1B0GV22 79 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 SLPIP03973 132 aa13.22□□□□□ -0.29
CACNA1A-253ENST00000637927 INAFM1C9JVW0 142 aa13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-253ENST00000637927 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.3
CACNA1A-253ENST00000637927 C9orf85Q96MD7 179 aa13.21□□□□□ -0.3
CACNA1A-253ENST00000637927 C15orf65H3BRN8 121 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 TRBV12-3P01733 135 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 ATRXP46100 2492 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLC7A0M8Q6 106 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 CTSZQ9UBR2 303 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 USP17L23D6RBM5 183 aa13.2□□□□□ -0.3
CACNA1A-253ENST00000637927 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 CRYGDP07320 174 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EP13 123 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLL1P15814 213 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 NDUFC2O95298 119 aa13.19□□□□□ -0.3
CACNA1A-253ENST00000637927 TRBV10-2A0A0K0K1G8 114 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00482Q8N8I6 264 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 K7ERS5 55 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 DIRC1Q969H9 104 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 V9GYV3 84 aa13.18□□□□□ -0.3
CACNA1A-253ENST00000637927 Q6ZWC4 215 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 SMIM20Q8N5G0 67 aa13.17□□□□□ -0.3
CACNA1A-253ENST00000637927 Q8NFD4 153 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CFC1BP0CG36 223 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CFC1P0CG37 223 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 CT83Q5H943 113 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 F8VRH5 84 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 F8W1H4 67 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 A0A0J9YXV3 536 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 FAM236DA0A1B0GTK5 79 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 A4D1N5 150 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EP34 96 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 FAM236CP0DP71 79 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 Q8N1Y9 231 aa13.16□□□□□ -0.3
CACNA1A-253ENST00000637927 C3orf84H3BNL1 204 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 PLA2G2AP14555 144 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 K7EN84 100 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 LYL1P12980 280 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
CACNA1A-253ENST00000637927 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.31
CACNA1A-253ENST00000637927 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 Q6ZS49 121 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 IGHV2-70P01814 119 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 ROS1P08922 2347 aa13.14□□□□□ -0.31
CACNA1A-253ENST00000637927 MIR7-3HGQ8N6C7 128 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 ACACAQ13085 2346 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 PLXNA2O75051 1894 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV2-8P01709 118 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 CRYGBP07316 175 aa13.13□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 TTTY13Q9BZ97 58 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 TNCP24821 2201 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 COX8AP10176 69 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 AGPAT4-IT1Q9H0P7 198 aa13.12□□□□□ -0.31
CACNA1A-253ENST00000637927 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 LINC00173Q6ZV60 143 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 UBE2D2P62837 147 aa13.11□□□□□ -0.31
CACNA1A-253ENST00000637927 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 RSPO1Q2MKA7 263 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-253ENST00000637927 SPINK1P00995 79 aa13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-253ENST00000637927 UPK3BQ9BT76 320 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms