RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 A0A1B0GUT8 65 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 C20orf202A1L168 122 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 ARMS2P0C7Q2 107 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 Q56UQ5 140 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF493Q6ZR52 646 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF502Q8TBZ5 544 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 THYN1Q9P016 225 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 UQCR10Q9UDW1 63 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 A0A087X0K7 114 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 FBLL1A6NHQ2 334 aaKnown RBP3.55□□□□□ -1.84
LINC00550-201ENST00000629293 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
LINC00550-201ENST00000629293 TCAPO15273 167 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF207O43670 478 aaKnown RBP3.55□□□□□ -1.84
LINC00550-201ENST00000629293 RPL7P18124 248 aaKnown RBP3.55□□□□□ -1.84
LINC00550-201ENST00000629293 TFPI2P48307 235 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 PSG9Q00887 426 aa3.55□□□□□ -1.84
LINC00550-201ENST00000629293 TRAV9-2A0A087WT02 112 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.54□□□□□ -1.84
LINC00550-201ENST00000629293 H3BUA1 57 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 CHEK1O14757 476 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 DEFB4AO15263 64 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 RIGQ13278 110 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF575Q86XF7 245 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 OVOL2Q9BRP0 275 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 CLEC5AQ9NY25 188 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 SRRM2Q9UQ35 2752 aaKnown RBP3.54□□□□□ -1.84
LINC00550-201ENST00000629293 OR2T8A6NH00 312 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 SH2D1AO60880 128 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 LINC00614P0C842 121 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 GPR183P32249 361 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 MAJINQ3KP22 176 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 TMEM70Q9BUB7 260 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 RABAC1Q9UI14 185 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 KLK5Q9Y337 293 aaPredicted RBP3.54□□□□□ -1.84
LINC00550-201ENST00000629293 ALMS1Q8TCU4 4167 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 IGKV2-40A0A087WW87 121 aaPredicted RBP3.54□□□□□ -1.84
LINC00550-201ENST00000629293 IGHV3-49A0A0A0MS15 119 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 NUPR2A6NF83 97 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 SCGB2A1O75556 95 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 IGKV2D-40P01614 121 aaPredicted RBP3.54□□□□□ -1.84
LINC00550-201ENST00000629293 OR5AL1P0C617 328 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 LINC00173Q6ZV60 143 aa3.54□□□□□ -1.84
LINC00550-201ENST00000629293 FAM223BA6NKX1 122 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 SYS1-DBNDD2H3BUS1 97 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 IGLC6P0CF74 106 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 BMI1P35226 326 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 CSN1S1P47710 185 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 SAPCD1Q5SSQ6 148 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 UNQ9165/PRO28630Q6UXU0 137 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 FAM223AQ8IWN6 122 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 ATOH7Q8N100 152 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 PHLDA1Q8WV24 401 aaPredicted RBP3.53□□□□□ -1.84
LINC00550-201ENST00000629293 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
LINC00550-201ENST00000629293 AGRNO00468 2067 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 PRB4P10163 310 aaPredicted RBP3.53□□□□□ -1.84
LINC00550-201ENST00000629293 TSPOP30536 169 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF80P51504 273 aaPredicted RBP3.53□□□□□ -1.84
LINC00550-201ENST00000629293 CEMP1Q6PRD7 247 aaPredicted RBP3.53□□□□□ -1.84
LINC00550-201ENST00000629293 CNFNQ9BYD5 112 aa3.53□□□□□ -1.84
LINC00550-201ENST00000629293 TMEM213A2RRL7 107 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 TMEM189A5PLL7 270 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 RBAKDNA6NC62 111 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 BUB3O43684 328 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 LEPROTL1O95214 131 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 HLA-DMBP28068 263 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 S100A7P31151 101 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.85
LINC00550-201ENST00000629293 NANOS2P60321 138 aaKnown RBP3.53□□□□□ -1.85
LINC00550-201ENST00000629293 RPS20P60866 119 aaKnown RBP3.53□□□□□ -1.85
LINC00550-201ENST00000629293 RELQ04864 619 aaPredicted RBP3.53□□□□□ -1.85
LINC00550-201ENST00000629293 GAGE1Q13065 139 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 LYZL1Q6UWQ5 148 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 VGLL1Q99990 258 aa3.53□□□□□ -1.85
LINC00550-201ENST00000629293 A0A096LNJ9 63 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 OR4C46A6NHA9 309 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 ZNF138P52744 262 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 LINC01545Q5VT33 79 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 FAM104BQ5XKR9 115 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 Q6ZN92 141 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 OR2K2Q8NGT1 345 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 Q8TAT8 98 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 ST20Q9HBF5 79 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 LAMTOR2Q9Y2Q5 125 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 HERC2O95714 4834 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 IGLL5B9A064 214 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 F8WDY8 70 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 APOC4P55056 127 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 MRPL53Q96EL3 112 aaKnown RBP3.52□□□□□ -1.85
LINC00550-201ENST00000629293 C11orf21Q9P2W6 132 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 HSPB8Q9UJY1 196 aa3.52□□□□□ -1.85
LINC00550-201ENST00000629293 TRBV7-1A0A0A6YYK4 115 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms