RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MANBALQ9NQG1 85 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 PHLDA3Q9Y5J5 127 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
TCF4-249ENST00000625716 hCG_2014768A0A024R1R8 64 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 TMSB15BA0A087X1C1 80 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 TRAV8-6A0A0B4J262 113 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 TRBV6-4A0A1B0GX49 114 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 KRBOX1C9JBD0 128 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 H3BVH4 76 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 MGST1P10620 155 aaKnown RBP4.38□□□□□ -1.71
TCF4-249ENST00000625716 PIK3CD-AS1Q5SR53 167 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 ZFP2Q6ZN57 461 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 SLC51BQ86UW2 128 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 SLC25A29Q8N8R3 303 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 IL36BQ9NZH7 164 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 GNG13Q9P2W3 67 aa4.38□□□□□ -1.71
TCF4-249ENST00000625716 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
TCF4-249ENST00000625716 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 LOC100131303A0A0U1RQF7 123 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 B5MCH6 92 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 K7EP13 123 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 SULT1A2P50226 295 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 CRIP1P50238 77 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 CT83Q5H943 113 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 OR10J3Q5JRS4 329 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 DNLZQ5SXM8 178 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 DAZAP1Q96EP5 407 aaKnown RBP4.37□□□□□ -1.71
TCF4-249ENST00000625716 PARLQ9H300 379 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
TCF4-249ENST00000625716 NACAE9PAV3 2078 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 A0A1B0GVG6 124 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 C16orf90A8MZG2 172 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 M0R381 172 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 RHODO00212 210 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 PDE6DO43924 150 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 CRYGDP07320 174 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 TAGLN2P37802 199 aaKnown RBP4.36□□□□□ -1.71
TCF4-249ENST00000625716 RPL35P42766 123 aaKnown RBP4.36□□□□□ -1.71
TCF4-249ENST00000625716 TIRAPP58753 221 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 LINC00315P59091 139 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 CCL20P78556 96 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 FAM74A4Q5TZK3 123 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 PRR27Q6MZM9 219 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 WFDC10BQ8IUB3 73 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 ZFP82Q8N141 532 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 C10orf126Q8N4M7 172 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 ATP6V0E2Q8NHE4 81 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
TCF4-249ENST00000625716 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 A0A087WWL8 130 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GNG4P50150 75 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 ERVFC1-1P60608 527 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GAGE1Q13065 139 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GAGE4Q13068 117 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GAGE5Q13069 117 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 LELP1Q5T871 98 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 SPANXN1Q5VSR9 72 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 SPATA12Q7Z6I5 190 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 C9orf62Q8N4C0 152 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.35□□□□□ -1.71
TCF4-249ENST00000625716 SFRP2Q96HF1 295 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 JPT2Q9H910 190 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 BIN3Q9NQY0 253 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 MED9Q9NWA0 146 aa4.35□□□□□ -1.71
TCF4-249ENST00000625716 MUC4Q99102 2169 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 A0A087WWC5 75 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 XKRY2A2RUG3 117 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 F5H697 171 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 PSCAO43653 123 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 CXCL1P09341 107 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 SMIM17P0DL12 118 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 BCL2P10415 239 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 RPS20P60866 119 aaKnown RBP4.34□□□□□ -1.71
TCF4-249ENST00000625716 SSTP61278 116 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 RPL19P84098 196 aaKnown RBP4.34□□□□□ -1.71
TCF4-249ENST00000625716 MEF2BQ02080 365 aaPredicted RBP4.34□□□□□ -1.71
TCF4-249ENST00000625716 CENPWQ5EE01 88 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 KCNIP4Q6PIL6 250 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 C11orf52Q96A22 123 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 DERL1Q9BUN8 251 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 SAMD10Q9BYL1 202 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 SCRT2Q9NQ03 307 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 VAX2Q9UIW0 290 aa4.34□□□□□ -1.71
TCF4-249ENST00000625716 RAB19A4D1S5 217 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 P01737 135 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 IGHV3-33P01772 117 aa4.33□□□□□ -1.72
TCF4-249ENST00000625716 IGHV3-30-3P0DP02 117 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms