RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ID1P41134 155 aa8.43□□□□□ -1.06
VARS2-213ENST00000625423 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
VARS2-213ENST00000625423 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
VARS2-213ENST00000625423 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
VARS2-213ENST00000625423 LGALS1P09382 135 aaKnown RBP8.42□□□□□ -1.06
VARS2-213ENST00000625423 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
VARS2-213ENST00000625423 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 AGRNO00468 2067 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 ACANP16112 2415 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 C10orf99Q6UWK7 81 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 F5H697 171 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 CRYGDP07320 174 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 TP53TG1Q9Y2A0 90 aa8.42□□□□□ -1.06
VARS2-213ENST00000625423 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 A0A087WW49 117 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 K7EMT4 169 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 TSHBP01222 138 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 EMP1P54849 157 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 FOXI2Q6ZQN5 318 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 MTURNQ8N3F0 131 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 ZNF688P0C7X2 276 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 PRRC2AP48634 2157 aaKnown RBP8.41□□□□□ -1.06
VARS2-213ENST00000625423 WNK1Q9H4A3 2382 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
VARS2-213ENST00000625423 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
VARS2-213ENST00000625423 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
VARS2-213ENST00000625423 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.06
VARS2-213ENST00000625423 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
VARS2-213ENST00000625423 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.06
VARS2-213ENST00000625423 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 LINC01619G3V211 115 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 IGHV4-59P01825 116 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 PSMB8P28062 276 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 MAPK1IP1LQ8NDC0 245 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 KLHL30-AS1Q8NEE0 82 aa8.4□□□□□ -1.07
VARS2-213ENST00000625423 B4DSR2 109 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 H3BMG7 143 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 AMTNQ6UX39 209 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 IGIPA6NJ69 53 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 VCYO14598 125 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 RPL32P62910 135 aaKnown RBP8.39□□□□□ -1.07
VARS2-213ENST00000625423 WFDC2Q14508 124 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 MTORP42345 2549 aa8.39□□□□□ -1.07
VARS2-213ENST00000625423 CSMD2Q7Z408 3487 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 HELZ2Q9BYK8 2649 aaKnown RBP8.38□□□□□ -1.07
VARS2-213ENST00000625423 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 COX6B1P14854 86 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
VARS2-213ENST00000625423 SAMD13Q5VXD3 122 aa8.38□□□□□ -1.07
VARS2-213ENST00000625423 PMVKQ15126 192 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 Q8N1Y9 231 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 ZNF256Q9Y2P7 627 aaPredicted RBP8.37□□□□□ -1.07
VARS2-213ENST00000625423 NACAE9PAV3 2078 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 A0A0J9YX75 114 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 F8W1H4 67 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 SRSF9Q13242 221 aaKnown RBP eCLIP8.37□□□□□ -1.07
VARS2-213ENST00000625423 C9orf85Q96MD7 179 aa8.37□□□□□ -1.07
VARS2-213ENST00000625423 LGALS9O00182 355 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 SNRPD3P62318 126 aaKnown RBP8.36□□□□□ -1.07
VARS2-213ENST00000625423 ZNF56Q15929 161 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 SPINK13Q1W4C9 94 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
VARS2-213ENST00000625423 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 DUX5Q96PT3 197 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
VARS2-213ENST00000625423 HECTD1Q9ULT8 2610 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 HERVK_113P61574 105 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 PAPPA-AS1Q5QFB9 102 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 SH2D6Q7Z4S9 175 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 ZNF843Q8N446 348 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 TIMM17AQ99595 171 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 K7EQG2 157 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
VARS2-213ENST00000625423 IGHV1OR15-1A0A075B7D0 117 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 M0QY20 66 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 ODF3Q96PU9 254 aa8.35□□□□□ -1.07
VARS2-213ENST00000625423 MRPL16Q9NX20 251 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms