RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
VTA1-205ENST00000620996 SCGB1A1P11684 91 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 EVI2AP22794 236 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 UFSP1Q6NVU6 142 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 LINC01006Q8NI28 216 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 LENEPQ9Y5L5 61 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 K7EMI3 77 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 FAM159AQ6UWV7 190 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 TMEM61Q8N0U2 210 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
VTA1-205ENST00000620996 INSL3P51460 131 aa7.43□□□□□ -1.22
VTA1-205ENST00000620996 RAX2Q96IS3 184 aa7.43□□□□□ -1.22
VTA1-205ENST00000620996 INAFM1C9JVW0 142 aa7.43□□□□□ -1.22
VTA1-205ENST00000620996 WFDC2Q14508 124 aa7.43□□□□□ -1.22
VTA1-205ENST00000620996 CCL24O00175 119 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 CD7P09564 240 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
VTA1-205ENST00000620996 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 A0A0J9YX75 114 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 MGPP08493 103 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 TMEM97Q5BJF2 176 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 ZNF493Q6ZR52 646 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 URB1-AS1Q96HZ7 61 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
VTA1-205ENST00000620996 LEPP41159 167 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 ANAPC13Q9BS18 74 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
VTA1-205ENST00000620996 NPYP01303 97 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 HILS1P60008 231 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 C3orf56Q8N813 242 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 AGRNO00468 2067 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
VTA1-205ENST00000620996 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
VTA1-205ENST00000620996 FABP2P12104 132 aa7.4□□□□□ -1.22
VTA1-205ENST00000620996 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.22
VTA1-205ENST00000620996 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.22
VTA1-205ENST00000620996 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
VTA1-205ENST00000620996 C20orf78Q9BR46 151 aa7.4□□□□□ -1.22
VTA1-205ENST00000620996 MRPL16Q9NX20 251 aaKnown RBP7.4□□□□□ -1.22
VTA1-205ENST00000620996 SIGLEC8Q9NYZ4 499 aa7.4□□□□□ -1.22
VTA1-205ENST00000620996 J3QR89 54 aa7.4□□□□□ -1.23
VTA1-205ENST00000620996 SPAG8Q99932 426 aaPredicted RBP7.4□□□□□ -1.23
VTA1-205ENST00000620996 CACNG7P62955 275 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 MAP1LC3AQ9H492 121 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 DEFB114Q30KQ6 69 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 FAM19A4Q96LR4 140 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 A0A1W2PPM0 123 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 A6NDN8 102 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 KLLNB2CW77 178 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 K7ERJ3 54 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 TSPAN13O95857 204 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 AMTNQ6UX39 209 aa7.39□□□□□ -1.23
VTA1-205ENST00000620996 SMIM17P0DL12 118 aa7.38□□□□□ -1.23
VTA1-205ENST00000620996 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
VTA1-205ENST00000620996 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
VTA1-205ENST00000620996 TNFRSF6BO95407 300 aa7.38□□□□□ -1.23
VTA1-205ENST00000620996 FAM74A4Q5TZK3 123 aa7.38□□□□□ -1.23
VTA1-205ENST00000620996 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
VTA1-205ENST00000620996 ANK3Q12955 4377 aaKnown RBP7.38□□□□□ -1.23
VTA1-205ENST00000620996 F5H697 171 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 MAP6D1Q9H9H5 199 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 SETXQ7Z333 2677 aaKnown RBP7.37□□□□□ -1.23
VTA1-205ENST00000620996 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 GAGE5Q13069 117 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 GAGE6Q13070 117 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 MAP1LC3CQ9BXW4 147 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 A0A087WWL8 130 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 M0QXV9 152 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
VTA1-205ENST00000620996 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
VTA1-205ENST00000620996 H3BMG7 143 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 GCSHP23434 173 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 Q8N1Y9 231 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 SYT8Q8NBV8 401 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 OR5A1Q8NGJ0 315 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 DEFB104AQ8WTQ1 72 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 FAM110AQ9BQ89 295 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 JPT2Q9H910 190 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 MDFICQ9P1T7 246 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms