RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CFAP161Q6P656 301 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 A6NDX4 124 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 C19orf84I3L1E1 186 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 NDUFA12Q9UI09 145 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 TNRC6BQ9UPQ9 1833 aaKnown RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 TRAV8-4A0A0B4J246 113 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 GAGE4Q13068 117 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 GAGE5Q13069 117 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
CNOT3-210ENST00000618939 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 C2orf82Q6UX34 121 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 Q8N6K4 173 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 AZU1P20160 251 aa10.61□□□□□ -0.71
CNOT3-210ENST00000618939 TSSC4Q9Y5U2 329 aaPredicted RBP10.6□□□□□ -0.71
CNOT3-210ENST00000618939 RNASE13Q5GAN3 156 aaKnown RBP10.59□□□□□ -0.71
CNOT3-210ENST00000618939 SLURP1P55000 103 aa10.59□□□□□ -0.71
CNOT3-210ENST00000618939 Q8N1Y9 231 aa10.59□□□□□ -0.71
CNOT3-210ENST00000618939 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
CNOT3-210ENST00000618939 IGLL5B9A064 214 aa10.59□□□□□ -0.71
CNOT3-210ENST00000618939 IGF1P05019 195 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
CNOT3-210ENST00000618939 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 A0A087WW49 117 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 CDSNQ15517 529 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 FGF6P10767 208 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 MALP21145 153 aa10.58□□□□□ -0.72
CNOT3-210ENST00000618939 CRPP02741 224 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 CFHR3Q02985 330 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 LAMA3Q16787 3333 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 DEFB130BP0DP73 79 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 DEFB130AP0DP74 79 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 U3KQK5 164 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 TET2Q6N021 2002 aaPredicted RBP10.57□□□□□ -0.72
CNOT3-210ENST00000618939 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
CNOT3-210ENST00000618939 Q8N976 141 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 JPT2Q9H910 190 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 HIVEP3Q5T1R4 2406 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 PPDPFLQ8WWR9 84 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE2BQ13066 116 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 E9PLD3 99 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 PAX4O43316 350 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE7O76087 117 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE12FP0CL80 117 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE12GP0CL81 117 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE12IP0CL82 117 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 RNF185Q96GF1 192 aa10.56□□□□□ -0.72
CNOT3-210ENST00000618939 C11orf68Q9H3H3 251 aaKnown RBP10.56□□□□□ -0.72
CNOT3-210ENST00000618939 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 U3KQE9 123 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 A0A0J9YX75 114 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 LEPROTO15243 131 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
CNOT3-210ENST00000618939 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 SPINK8P0C7L1 97 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 A0A0C4DFX4 3053 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
CNOT3-210ENST00000618939 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
CNOT3-210ENST00000618939 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 ZFAND6Q6FIF0 208 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 USP9YO00507 2555 aaPredicted RBP10.54□□□□□ -0.72
CNOT3-210ENST00000618939 LAMA2P24043 3122 aaKnown RBP10.54□□□□□ -0.72
CNOT3-210ENST00000618939 TRANK1O15050 2925 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 PRB1P04280 392 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
CNOT3-210ENST00000618939 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
CNOT3-210ENST00000618939 CKS1BP61024 79 aa10.53□□□□□ -0.72
CNOT3-210ENST00000618939 DEFB113Q30KQ7 82 aa10.53□□□□□ -0.72
CNOT3-210ENST00000618939 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
CNOT3-210ENST00000618939 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
CNOT3-210ENST00000618939 USP9XQ93008 2570 aaPredicted RBP10.53□□□□□ -0.72
CNOT3-210ENST00000618939 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
CNOT3-210ENST00000618939 IGHG4P01861 327 aa10.53□□□□□ -0.72
CNOT3-210ENST00000618939 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.72
CNOT3-210ENST00000618939 PRORYQ9H606 182 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms