RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 ZNF56Q15929 161 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 ZFYVE26Q68DK2 2539 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
MSH6-214ENST00000616033 B9A039 149 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 LINC00477Q96M19 166 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 EDA2RQ9HAV5 297 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
MSH6-214ENST00000616033 HRNRQ86YZ3 2850 aaPredicted RBP10.01□□□□□ -0.81
MSH6-214ENST00000616033 OOSP1A8MZH6 123 aa10□□□□□ -0.81
MSH6-214ENST00000616033 CFC1BP0CG36 223 aa10□□□□□ -0.81
MSH6-214ENST00000616033 CFC1P0CG37 223 aa10□□□□□ -0.81
MSH6-214ENST00000616033 TSPEAR-AS2P59090 65 aa10□□□□□ -0.81
MSH6-214ENST00000616033 ASIPP42127 132 aa10□□□□□ -0.81
MSH6-214ENST00000616033 HERVK_113P61574 105 aa10□□□□□ -0.81
MSH6-214ENST00000616033 Q8NA96 180 aa10□□□□□ -0.81
MSH6-214ENST00000616033 C20orf173Q96LM9 149 aa10□□□□□ -0.81
MSH6-214ENST00000616033 SLC25A20O43772 301 aa10□□□□□ -0.81
MSH6-214ENST00000616033 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
MSH6-214ENST00000616033 TOMM6Q96B49 74 aa10□□□□□ -0.81
MSH6-214ENST00000616033 TIMD4Q96H15 378 aa10□□□□□ -0.81
MSH6-214ENST00000616033 A4D1N5 150 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 RNF5Q99942 180 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
MSH6-214ENST00000616033 IGFL3Q6UXB1 125 aa9.99□□□□□ -0.81
MSH6-214ENST00000616033 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
MSH6-214ENST00000616033 MUC4Q99102 2169 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 A0A0J9YY99 117 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 TRBV12-3P01733 135 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 NPBQ8NG41 125 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
MSH6-214ENST00000616033 RHODO00212 210 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 PRO1854Q9UHT4 67 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 ACACBO00763 2458 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 CLPSL1A2RUU4 121 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 CD7P09564 240 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
MSH6-214ENST00000616033 IGHV3-73A0A0B4J1V6 119 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 A0A0U1RRA0 63 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 UBE2D1P51668 147 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 LY6EQ16553 131 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 Q8N9W7 124 aa9.96□□□□□ -0.82
MSH6-214ENST00000616033 CRYGDP07320 174 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 ELANEP08246 267 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 LY6DQ14210 128 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 PRRC2AP48634 2157 aaKnown RBP9.95□□□□□ -0.82
MSH6-214ENST00000616033 TRAV12-3A0A0B4J271 114 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 ZFP36P26651 326 aaKnown RBP9.95□□□□□ -0.82
MSH6-214ENST00000616033 CRYBG3Q68DQ2 2970 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 Q6ZSV7 163 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 SPXQ9BT56 116 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 J3QQQ9 107 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 CCL21O00585 134 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 CSDC2Q9Y534 153 aaKnown RBP9.95□□□□□ -0.82
MSH6-214ENST00000616033 WNK1Q9H4A3 2382 aa9.95□□□□□ -0.82
MSH6-214ENST00000616033 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 LINC01546A6NGU7 62 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 ZNRF2Q8NHG8 242 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 EEF1AKMT3Q96AZ1 226 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 SDHAF1A6NFY7 115 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 TSHBP01222 138 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 IGF2-ASQ6U949 168 aa9.94□□□□□ -0.82
MSH6-214ENST00000616033 USP9YO00507 2555 aaPredicted RBP9.93□□□□□ -0.82
MSH6-214ENST00000616033 UBE2D3P61077 147 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 UBE2D2P62837 147 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 PMVKQ15126 192 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 Q8N1Y9 231 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 RBAKDNA6NC62 111 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
MSH6-214ENST00000616033 CENPEQ02224 2701 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 EDN2P20800 178 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 SAA4P35542 130 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 PTPN13Q12923 2485 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 MYO9AB2RTY4 2548 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 K7ENP7 123 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms