RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 FAM231CP0DMU5 169 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 EMP1P54849 157 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 CACNG7P62955 275 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 BATFQ16520 125 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 SPATA45Q537H7 98 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 DEFB125Q8N687 156 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 TMEM158Q8WZ71 300 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 RASL10AQ92737 203 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 AP1S3Q96PC3 154 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 MAP1LC3CQ9BXW4 147 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 DPH3P1Q9H4G8 78 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 MRPL16Q9NX20 251 aaKnown RBP2.52□□□□□ -2.01
LIG4-205ENST00000614526 Q9UF83 564 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 U3KQK5 164 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 CRLF1O75462 422 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 IGHV3-53P01767 116 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 PRSS1P07477 247 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 RIPPLY3P57055 190 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 DEFA6Q01524 100 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 NRACQ8N912 160 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 ZNF747Q9BV97 191 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 TMEM160Q9NX00 188 aa2.52□□□□□ -2.01
LIG4-205ENST00000614526 NDUFA7O95182 113 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 NUDT3O95989 172 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 PPBPP02775 128 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 SUMO4Q6EEV6 95 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 TEX43Q6ZNM6 134 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 LINC00482Q8N8I6 264 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 CSTL1Q9H114 145 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 SCRT2Q9NQ03 307 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 HBDP02042 147 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 IGLL1P15814 213 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 SUMO2P61956 95 aaKnown RBP2.51□□□□□ -2.01
LIG4-205ENST00000614526 STPG4Q8N801 248 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 DKK2Q9UBU2 259 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 HSPB8Q9UJY1 196 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 IGHV4-4A0A075B6R2 117 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 TRBV7-9A0A0J9YWB2 115 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 CRYGDP07320 174 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 LINC00315P59091 139 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 ZC2HC1BQ5TFG8 222 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 C1orf158Q8N1D5 194 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 KIF25-AS1Q9Y6Z4 181 aa2.51□□□□□ -2.01
LIG4-205ENST00000614526 TRGV1A0A0A0MS02 117 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 INSP01308 110 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 NDUFA11Q86Y39 141 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 Q8N8P6 123 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 SYT8Q8NBV8 401 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 ODF3Q96PU9 254 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 SMIM2Q9BVW6 85 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 NOTCH1P46531 2555 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 PKD1L1Q8TDX9 2849 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 TRGV11A0A075B6L2 103 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 IGHV3-38A0A0C4DH36 116 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 SDHAF1A6NFY7 115 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 RPL39P62891 51 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 CTAG1AP78358 180 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 LAGE3Q14657 143 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 Q6ZN92 141 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 Q6ZSN1 163 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 ZMAT5Q9UDW3 170 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 TRAV9-2A0A087WT02 112 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 C20orf202A1L168 122 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 DEFB4AO15263 64 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 FCER1GP30273 86 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 NUTF2P61970 127 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 TRPT1Q86TN4 253 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 PHLDA1Q8WV24 401 aaPredicted RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 MRAP2Q96G30 205 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 OPRPNQ99935 248 aaPredicted RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 ST20Q9HBF5 79 aa2.5□□□□□ -2.01
LIG4-205ENST00000614526 NOP10Q9NPE3 64 aaKnown RBP2.5□□□□□ -2.01
LIG4-205ENST00000614526 TRAV25A0A0B4J276 109 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 KIR2DL5BA0A0G2JN68 375 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 KIR2DL5BA0A0G2JPC4 375 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 EREGO14944 169 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
LIG4-205ENST00000614526 MORN3Q6PF18 240 aaPredicted RBP2.49□□□□□ -2.01
LIG4-205ENST00000614526 Q6ZTI0 123 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 KIR2DL5AQ8N109 375 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 SCGB3A1Q96QR1 104 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GOLT1BQ9Y3E0 138 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GAGE12BA1L429 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 HSBP1L1C9JCN9 74 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 M0QY20 66 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GAGE7O76087 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GAGE12FP0CL80 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GAGE12GP0CL81 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 GAGE12IP0CL82 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 IGLC3P0DOY3 106 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 MED14OSP0DP75 135 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 FOSL1P15407 271 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 ZNF415Q09FC8 603 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms