RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CRIP1P50238 77 aa11.76□□□□□ -0.53
SSBP1-215ENST00000612337 ZNF345Q14585 488 aa11.76□□□□□ -0.53
SSBP1-215ENST00000612337 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
SSBP1-215ENST00000612337 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
SSBP1-215ENST00000612337 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 KRBOX1C9JBD0 128 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 Q6ZSA8 131 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 ZFP30Q9Y2G7 519 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
SSBP1-215ENST00000612337 LECT2O14960 151 aa11.74□□□□□ -0.53
SSBP1-215ENST00000612337 A0A0D9SG52 128 aa11.73□□□□□ -0.53
SSBP1-215ENST00000612337 M0R036 132 aa11.73□□□□□ -0.53
SSBP1-215ENST00000612337 SH2D1AO60880 128 aa11.73□□□□□ -0.53
SSBP1-215ENST00000612337 FAM162BQ5T6X4 162 aa11.73□□□□□ -0.53
SSBP1-215ENST00000612337 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 FHITP49789 147 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 FAM74A4Q5TZK3 123 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 NIT1Q86X76 327 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 STOML3Q8TAV4 291 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 RMI2Q96E14 147 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 FMC1Q96HJ9 113 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
SSBP1-215ENST00000612337 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-215ENST00000612337 UBE2G1P62253 170 aa11.71□□□□□ -0.53
SSBP1-215ENST00000612337 ZNF674Q2M3X9 581 aa11.71□□□□□ -0.53
SSBP1-215ENST00000612337 BAALCQ8WXS3 180 aa11.71□□□□□ -0.53
SSBP1-215ENST00000612337 A0A087WWL8 130 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 UMAD1C9J7I0 102 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 BCL2L11O43521 198 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 PLA2G1BP04054 148 aaKnown RBP11.7□□□□□ -0.54
SSBP1-215ENST00000612337 TPT1P13693 172 aaKnown RBP11.7□□□□□ -0.54
SSBP1-215ENST00000612337 MBD3L1Q8WWY6 194 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
SSBP1-215ENST00000612337 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-215ENST00000612337 LRP1Q07954 4544 aaKnown RBP11.69□□□□□ -0.54
SSBP1-215ENST00000612337 LTAP01374 205 aa11.69□□□□□ -0.54
SSBP1-215ENST00000612337 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
SSBP1-215ENST00000612337 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
SSBP1-215ENST00000612337 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
SSBP1-215ENST00000612337 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 TMSB15BA0A087X1C1 80 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 M0R381 172 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 ZFP82Q8N141 532 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 LINC00528Q8N1L1 170 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 Q8N976 141 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 SFT2D1Q8WV19 159 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
SSBP1-215ENST00000612337 A0A087WX48 190 aa11.67□□□□□ -0.54
SSBP1-215ENST00000612337 J3QL48 77 aa11.67□□□□□ -0.54
SSBP1-215ENST00000612337 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
SSBP1-215ENST00000612337 ELOBQ15370 118 aa11.67□□□□□ -0.54
SSBP1-215ENST00000612337 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
SSBP1-215ENST00000612337 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
SSBP1-215ENST00000612337 UBE2WQ96B02 151 aa11.67□□□□□ -0.54
SSBP1-215ENST00000612337 TRBV7-3A0A075B6L6 115 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 PAGE4O60829 102 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 UBE2D3P61077 147 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 UBE2D2P62837 147 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
SSBP1-215ENST00000612337 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
SSBP1-215ENST00000612337 PFDN1O60925 122 aa11.65□□□□□ -0.54
SSBP1-215ENST00000612337 AKR1C3P42330 323 aa11.65□□□□□ -0.54
SSBP1-215ENST00000612337 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
SSBP1-215ENST00000612337 OR10G8Q8NGN5 311 aa11.65□□□□□ -0.54
SSBP1-215ENST00000612337 A0A1B0GV50 99 aa11.64□□□□□ -0.55
SSBP1-215ENST00000612337 Q0VG73 95 aa11.64□□□□□ -0.55
SSBP1-215ENST00000612337 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
SSBP1-215ENST00000612337 PKHD1L1Q86WI1 4243 aa11.64□□□□□ -0.55
SSBP1-215ENST00000612337 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
SSBP1-215ENST00000612337 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
SSBP1-215ENST00000612337 KRTAP29-1A8MX34 341 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-215ENST00000612337 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
SSBP1-215ENST00000612337 RAB4BP61018 213 aa11.62□□□□□ -0.55
SSBP1-215ENST00000612337 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
SSBP1-215ENST00000612337 TRBV6-8A0A0A6YYG3 113 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 TMEM262E9PQX1 116 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 CXCL1P09341 107 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 NEXN-AS1Q8NBZ9 246 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
SSBP1-215ENST00000612337 SCO2A0A1W2PP80 73 aa11.6□□□□□ -0.55
SSBP1-215ENST00000612337 RPL19P84098 196 aaKnown RBP11.6□□□□□ -0.55
SSBP1-215ENST00000612337 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
SSBP1-215ENST00000612337 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
SSBP1-215ENST00000612337 MLST8Q9BVC4 326 aa11.6□□□□□ -0.55
SSBP1-215ENST00000612337 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms